Enterobacter sp. 638: Ent638_1288
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Entry
Ent638_1288 CDS
T00507
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ent
Enterobacter sp. 638
Pathway
ent03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ent638_1288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ent03019
]
Ent638_1288
Enzymes [BR:
ent01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ent638_1288
Messenger RNA biogenesis [BR:
ent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ent638_1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABP59969
UniProt:
A0A9J9KY36
LinkDB
All DBs
Position
1415054..1416442
Genome browser
AA seq
462 aa
AA seq
DB search
MSFDTLGLNPEILRAVAEQGYLEPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QRLVQNEPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLDIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLAEKLLRNPLEIEVARRNTASEQVSQYVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIAIEGYEVDKSIKADPIQNGRQGGGGRGQGGGGGRSQQPRRSESGAPKAS
GKPPRRSGDAKPAGENPWRSGEAKPAGEGQRRRKPRKPASAQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgaacccggaaattctgcgcgccgtcgcagaacagggc
tacctcgagccaaccccaattcagcagcaggcgatccctgcggtgctggaaggccgtgac
ctgatggccagcgcacagaccggtaccggcaaaacggcgggctttacgctgccgctgctg
caacgtctggtgcagaacgagccgcacgcgaagggccgtcgcccggtgcgtgcgttgatc
ctgacgccaacccgtgaactggcggcgcagatcggcgagaacgtgcgtgagtacagccgc
tatctcgatatccgctcgctggtggttttcggcggtgtgagcattaacccacagatgatg
aaactgcgcagcggcgttgacgttttagtcgcgacgccaggccgtttgctggatctggaa
catcaaaacgcggtcaaactggatcaggtcgaaatcctggtgctggatgaagctgaccgt
atgctggacatgggctttatccatgacattcgtcgcgtgctggcgaaactgcctgctaag
cgtcagaacctgctgttctccgccaccttctctgatgagatcaaaggcctggcggaaaaa
ctgctgcgtaacccgctggaaattgaagtcgcgcgtcgtaacaccgcgtctgagcaggtt
tcacagtacgttcacttcgtggacaaaaagcgtaagcgggaactgctctcgcagatgatt
ggcgaaggcaactggcagcaggtgctggtcttcacccgtaccaaacacggcgctaaccat
ctggctgaacagctaaataaagacggcattcgcagtgcggcaatccatggcaacaagagc
cagggtgcccgtacgcgtgcattagctgatttcaaatccggtgacattcgcgtgctggtg
gcaacggatatcgccgcgcgcggtctggatatcgaagagctgccgcacgttgtgaactac
gagctgccaaacgtaccggaagattacgtacaccgtattggccgtaccggtcgtgctgcg
gccaccggtgaagcgctttcactggtttgcgtcgatgaacacaaactgctgcatgacatt
gagcgtctgctgaagaaagagattccgcgcatcgccattgaaggctatgaagtggataag
tccatcaaagctgatccgattcaaaacggtcgtcagggcggcggtggtcgtggacagggt
ggtggcggtggacgcagccagcagccgcgtcgttccgaaagcggcgcaccgaaagcgtca
ggtaagcctccgcgccgtagcggtgacgcaaagccggcgggcgaaaacccgtggcgcagc
ggagaagccaaacccgcaggcgaaggccaacgccgacgcaaaccacgtaaacctgcctcc
gcgcagtaa
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