Enterobacter sp. 638: Ent638_1600
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Entry
Ent638_1600 CDS
T00507
Name
(GenBank) RNAse E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ent
Enterobacter sp. 638
Pathway
ent03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ent638_1600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ent03019
]
Ent638_1600
03009 Ribosome biogenesis [BR:
ent03009
]
Ent638_1600
Enzymes [BR:
ent01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Ent638_1600
Messenger RNA biogenesis [BR:
ent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ent638_1600
Ribosome biogenesis [BR:
ent03009
]
Prokaryotic type
rRNA processing factors
Ent638_1600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
ABP60279
UniProt:
A0A9J9GG64
LinkDB
All DBs
Position
complement(1750705..1753851)
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AA seq
1048 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLGFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLRDAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLA
LSILRLIEEEALKENTKEVHAIVPVPVASYLLNEKREAVSAIEARQAGVRCIIVPNDQMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKLPEQPALATFIMPEAPPA
PSEQEATVKPAVQKSETEARVTSSEPGLLGRIFSALKKMFAGEEAQPEEPKAAPKEEKQE
RPQQDRRKRQNNRRDRNDRRDNRDNRDNRDNRDNRSENNEGREAREDNRRNRREKPQQNA
EDREIRQPAGDESEKSRQRDEQQPRRERNRRRNDDKRQAQQEVKAVTLEEPVVQEAEQEE
RVQVMPRRKQRQLSQKVRFESEQTEAATTAVSEPAVEESQNTQLAKLDLPAVVEPTHEQD
DNAEARDNNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPMTVACVSPEMASGKVW
IRYPIARPQDQQFEEQTVVETVEPMVAAPVAVEEVQHVVAEPQTVETVEVETTHPEVIAA
PVDAQPQVIAQQDAAVAEQIAEAAEPATPTDTFVEQPAVAEVKADIVADVEAEAVADVVT
EAEQPAPAVVAEQPVVEVKPQPAAPAVVGNHYATAPMTRAPAPEYQPEAPRQSDWVRPAF
DFEGKGSAGGHSATHQATAPATRPQSAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagctgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatattgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggcaaaatcacccgcattgaaccaagcctggaggccgctttcgtcgattac
ggcgctgagcgtcacggtttccttcctctgaaagaaattgcccgcgaatatttccctgcc
aactataactcccatggtcgtccgaacatcaaagatgtgctgcgcgaaggccaggaagtc
attgttcagattgataaagaagaacgcggcaacaaaggtgctgcgctgacaacctttatc
agcctggcgggtagttatctggtactgatgccaaacaacccgcgtgcgggtggtatctct
cgccgtattgaaggcgacgatcgtaccgagctgaaagaggcgttggccagtcttgaattg
cctgatggcatgggtctgattgtacgtactgcaggcgtcggtaaatctgccgaagcgttg
cagtgggacttaggattccgtctgaagcactgggaagccatccagaaagctgcagaaagc
cgtccggctccgttcctgattcaccaggaaagtaacgttatcgttcgtgctttccgtgat
tatcttcgtcaggacatcggtgagattctgatcgataacccgaaagtgcttgagctggcg
cgccagcatatcgctgcactgggccgtccagatttcaccagcaaaatcaaactgtacacc
ggagaaatcccgctgttcagccactatcagatcgaatcgcagattgagtccgctttccag
cgtgaagtacgtcttccttctggcggttccatcgttatcgattcgaccgaagcactgacc
gctatcgacatcaactccgcacgcgcaacccgcggcggcgatatcgaagaaaccgcgttc
aacaccaaccttgaagccgcagatgaaattgcccgtcagcttcgtctgcgcgacctcggt
ggtctgatcgttatcgactttatcgacatgacgcctgtgcgccaccagcgcgccgtggaa
aaccgtctgcgtgatgcggttcgtcaggatcgtgctcgtatccagatcagccatatttct
cgctttggtcttctggagatgtcacgtcagcgtctgagtccttctctgggtgaatccagc
caccacgtctgcccgcgctgtagcggtacaggtaccgtgcgtgacaacgaatcacttgca
ctctccattctgcgtctcatcgaagaagaagcgctgaaagagaacaccaaagaagttcac
gctattgttccggttccagtggcctcttacctgctgaacgaaaaacgtgaagcagtcagt
gccattgaagcacgccaggctggggtgcgttgcatcatcgttccaaacgatcagatgcaa
actccgcactactccgtgcttcgcgtacgcaaaggtgaagagacatcaactctgagctac
ctgttgccgaaactacacgaagaagagatggcgatgccttctgatgaagagcctgcggag
cgtaaactccctgagcagccagcattggccaccttcatcatgcccgaagcacctccggca
ccttctgagcaggaagcgaccgttaaacctgcagtgcagaaatctgaaaccgaagctcgc
gtgacgtcttcagaaccgggtctgctgggtcgtatcttcagcgcgctgaagaaaatgttc
gcgggtgaagaagctcagcctgaagagccgaaagcggctccgaaagaagagaaacaagag
cgtccgcagcaggaccgtcgtaagcgtcagaacaatcgccgcgatcgtaacgaccgccgt
gacaaccgcgataatcgtgataaccgcgacaaccgtgataatcgttctgaaaacaacgaa
ggtcgtgaagcgcgcgaagacaatcgtcgcaaccgtcgcgaaaaaccgcagcagaatgcg
gaagatcgtgaaatccgccagccagcgggcgatgagtctgaaaaatccagacagcgtgac
gagcagcagccacgtcgtgagcgtaaccgtcgtcgtaatgacgataagcgccaggcgcag
caggaagttaaagccgttactcttgaagagccagttgtccaggaagctgagcaggaagaa
cgcgtccaggtcatgccgcgtcgtaagcagcgccaactgtcgcagaaagttcgtttcgaa
tctgaacaaactgaagctgcaacgaccgctgtgagcgaacctgctgttgaagaatcgcag
aacacgcaactggcaaaactggatcttcctgctgtcgttgagccaacacatgagcaagac
gataatgcggaagcccgtgataacaatggtatgccacgtcgttcccgtcgctctccgcgc
cacctgcgcgtgagcggtcagcgtcgtcgtcgctatcgtgacgagcgttacccgacgcag
tcaccgatgccaatgaccgttgcctgcgtgtcgccagaaatggcttccggtaaagtgtgg
atccgctatccgattgcccgtcctcaggatcagcaatttgaagagcagactgtagttgaa
accgttgagccaatggtcgctgcgcctgttgcggttgaagaagtgcaacacgtcgtggct
gaaccgcagacagttgaaacggttgaagttgaaactacgcatccggaagtgatcgcagcg
ccggttgatgctcaacctcaggttatcgcgcaacaagatgctgctgttgctgagcaaatc
gctgaagccgctgaacctgcaacgccaactgacacgttcgtggaacagcctgctgttgcc
gaagtgaaagcagacattgtggcagacgtggaagctgaagccgtggcagatgttgtcact
gaagctgaacaacctgcgcctgccgtcgttgcagagcagcctgttgttgaagtgaagcca
cagccagctgcacctgctgttgtcggtaatcactacgcgacagcaccgatgacgcgtgct
ccagcaccggaatatcagccagaagcgccacgtcagagtgactgggtgcgtcctgcgttc
gatttcgaaggtaaaggttctgcgggtggccatagcgctactcatcaggcaacggcaccg
gcaacgcgtccgcagtctgctgagtaa
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