Enterobacter sp. 638: Ent638_1948
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Entry
Ent638_1948 CDS
T00507
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ent
Enterobacter sp. 638
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ent03019
]
Ent638_1948
Enzymes [BR:
ent01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Ent638_1948
Messenger RNA biogenesis [BR:
ent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ent638_1948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
WHD_HA2
nSTAND_NTPase5
NACHT
DUF6145
ResIII
PhoH
AAA_16
NTPase_1
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABP60624
UniProt:
A0A9J9GGP0
LinkDB
All DBs
Position
2110999..2114901
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPMLMQQLETLMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPDITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTLVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKIIITSATIDPQRFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEDADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTLQGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKKQA
PDEMHRRFHDKESDFLAFVNLWNYLGEQQKALTSNAFRRLCRTEYLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDVDKQEFTGARNARFAIFPGSGL
FKKPPKWTIVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRDNLKLRAEVEELE
HKSRRRDILVDDEALFEFYDQRISHDVVSGRHFDSWWKNASKETPDLLNFEKSMLIKEGA
ENVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLEMPLLDALERELRRMTGVTIDRESW
HWDQVPDHLKITFRVVDDKNKKLNEGRSLTELKDALKGKVQETLSAVADDGIEQSGLHIW
SFGNLPDHYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFATLHEK
VRAELNDTVVTIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMSGLVYRGFVTG
NGFKRLGDTLRYLNAIEKRLEKLAVDPHRDRVQMLKVESVQQAWQQWLNKLPPARRDDED
VQAIRWMIEELRVSLFAQQLGTPYPISDKRILQAMEQINS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccgatgcttatgcaacagctggaaacgctgatg
ttgcgcgataaacagcgctttgcgcgtcgcctgcatggggtgaagaaggttaaaaatcct
gatgcacaacaggccatttatcaggagatggcgaaagagattgaacaggctgcagggaaa
gtcgtgctgcgcgaagcggcgcgtccggatatcacctatccggaaaacttgcccgtcagt
cagaaaaaacaggaaattctcgaagccgttcgcgaccaccaggtggtgatcgtggcaggg
gaaaccggttcaggtaaaaccacgcagttgccgaaaatctgcatggagttaggacgcggt
gtgaagggcttgattggccatacccagccgcgtcgtctggccgcgcgaaccgtggcgaat
cgtatcgctgaagagttgcaaaccgagccgggcggctgcatcggttataaagtgcgcttc
agcgatcacgttagcgataacaccctggtcaagctaatgaccgacggtattctgctggcc
gaaatccagcaggatcgcctgctgatgcaatacgacacgattatcatcgatgaagcgcac
gagcgtagtctgaacatcgattttttgctgggctatttgcgtgaactgttaccgcgtcgc
ccggatctgaaaatcatcattacgtcggcgacaatcgatccgcaacgcttctcgcgccac
ttcaacaacgcgccgattatcgaagtttcaggccggacttatccggttgaagtgcgctat
cgcccgattgttgaagacgcagacgacaccgagcgcgatcagctgcaggctattttcgat
gcggtggatgaactggggcgcgaaagcccgggtgatattctcattttcatgagcggtgag
cgcgaaattcgcgataccgccgatgcgcttagcaagcgcgatctgcgccataccgagatt
ttgccactctacgcacgtctgtcgaacagcgagcaaaaccgcgtgttccagtcgcatcat
ggtcgtcgcatcgtgctcgcgaccaacgtggcggaaacctcgctcaccgtgcctggcatc
aaatatgtgattgatccgggtacggcgcgtatcagtcgctacagcttccgcaccaaagtg
cagcgcctgccgattgagccggtttcgcaagcctcggctaaccagcgtaaaggccgctgc
ggacgcgtctccgaaggtatctgtattcggttgtattccgaggacgatttcctgtcgcgt
ccggaatttaccgacccggaaattctgcgtaccaacctggcgtcggttattttgcagatg
accgcgctggggctgggcgatattgccgcgttcccgtttgttgaggcgccggataaacgc
aatattcaggacggggtgcgcctgctggaagagttgggcgccatcaccactgatgagcag
gccaccgcttataaactgacgctgcagggccgtcagctaagccagttgccggtcgatccg
cgtctggcacgtatggtgctggaagcgcaaaaacacggctgcgtgcgcgaagcgatgatt
atcacgtccgcgctgtctattcaggatccgcgcgagcgtccgatggataaaaagcaggcg
cccgacgaaatgcaccgtcgtttccacgacaaagagtcggatttcctcgcgtttgtgaat
ctgtggaattatcttggagagcagcaaaaagcgctcacgtccaatgcgtttcgtcgtctg
tgccggaccgaatacctgaactatttgcgcgtgcgcgagtggcaggatatctacacccag
ttgcgtcaggtggtcaaagagctggggatcccggtcaacagcgaaccggctgaatatcgt
gaaattcacgtcgccttgctgacggggctgttgtcgcatatcggcatgaaagatgtcgat
aaacaggaatttaccggcgcacgcaacgcccgtttcgcgatcttccccggctccggttta
ttcaagaaaccgccgaaatggaccatcgtcgcggagctggttgaaaccagccgcctgtgg
ggacgcattgccgcacggatcgatccagaatgggttgagcccgtggcgcaacacctgctg
aaacgctcatacagtgaaccgcactgggagcgcgcgcagggcgcggtgatggcgaccgaa
aaggtcaccgtttacggcctgccggtcgttgccgcgcgtaaggtaaattacagccagatt
gaccccgcgctgtcccgcgagctgtttattcgccatgcgctggtcgaaggcgactggcaa
acgcgtcacgcgtttttccgcgacaacctgaagctgcgcgccgaagtcgaagagctggag
cataaatcgcgtcgccgcgacatcctggtggacgacgaagcgttattcgaattctacgat
cagcgcatcagccatgatgtggtgtcgggccgtcacttcgacagctggtggaaaaacgcc
agtaaagagacgccagacttgctcaatttcgaaaagagcatgctgattaaagagggcgcg
gaaaacgtcagcaagctggactatccgaacttctggcatcagggcaatctcaagctgcgt
ctgacgtatcagtttgagccgggcgcagatgccgatggcgtaacggtgcatattccgctg
ccgttgctcaatcaggttgaagagagtggatttgagtggcaaattcccggcctgcgtcgt
gagctggtgattgcgctgatcaaatccctgccaaaaccggtgcgccgtaattttgttccc
gcgccaaactacgccgaggcgtttttaggccgcgtcacgccgctggaaatgccgctgctg
gatgcgctcgagcgcgagttgcgccgcatgaccggggtgacgatcgatcgtgaatcctgg
cactgggatcaggtcccagaccatctgaaaatcaccttccgggtggtggatgacaagaac
aaaaagctgaacgaaggccgttcgctgacggagctgaaagacgcgctgaaaggcaaagtg
caggagacgctttctgcggtggcggacgacggtatcgaacagagcggcctgcatatctgg
agctttggcaatctgccggatcattacgagcaaaaacgcggtaactataaagtgaaagcg
tggcctgcgctggtggacgaacgcgacagcgtggcgatcaagctctttgataatccgctg
gaacaacagcaggcgatgtggcgcggtttgcgtcgtttactgctgctgaatattccttcg
ccgatcaaatatcttcacgaaaaactgccaaacaaagccaaactcgggctgtatttcaac
ccttacggcaaagtgctggacttgattgacgactgcatctcgtgcggtgtggataagctg
atcgacgaggcgggcggtccggtctggacggaagagggctttgcgacgctgcacgaaaaa
gtgcgtgcggagttgaatgacaccgtggtgaccattgcgaaacaggtcgagcagatcctg
acggcggtattcaatatcaacaaacgcctgaaagggcgcgtcgatatgacgatggcgctg
ggattgtcggatgtgaaagcgcagatgagcggcctggtatatcgcggctttgtgaccggc
aacgggtttaaacgcctcggcgatacgctgcgttatctgaacgcaattgaaaaacgcctc
gagaagctggccgtggatccgcaccgcgatcgcgtacaaatgctgaaggtcgaaagcgtt
cagcaggcgtggcagcagtggctgaacaagctgccgcctgcgcgccgcgacgatgaggac
gtgcaggcgatccgttggatgatcgaagagttgcgcgtcagcctcttcgcacaacagctc
ggtacgccgtatccgatatcagataagcgtattttgcaggccatggagcaaatcaatagc
tag
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