Enterobacter sp. 638: Ent638_3974
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Entry
Ent638_3974 CDS
T00507
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ent
Enterobacter sp. 638
Pathway
ent03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ent638_3974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ent03019
]
Ent638_3974
03400 DNA repair and recombination proteins [BR:
ent03400
]
Ent638_3974
Enzymes [BR:
ent01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ent638_3974
Messenger RNA biogenesis [BR:
ent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ent638_3974
DNA repair and recombination proteins [BR:
ent03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ent638_3974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABP62629
UniProt:
A0A9J9GJH5
LinkDB
All DBs
Position
complement(4306536..4308365)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACINSTQTREQQQDVMAGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMAL
TATADDTTRQDIVRLLGLNDPFSQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQTRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQM
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDVCLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGKEQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDIELQLAVPRVIALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagttttgaatcaggaatcgctggctaaacaggttttacaagaaacc
tttggctatcagcaattccgccctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgtctggtggtgatgccgaccggcggcggaaagtccctgtgctatcaggtgccc
gcgctggtgctgaacggccttacggtcgtggtttcaccgctaatctcgttgatgaaagat
caggtggaccagctgctggcgaacggtgttgccgccgcctgtatcaactccacgcaaacc
cgcgaacagcagcaggacgtgatggcaggctgccgtaccggacaaattcgcctgctgtat
atcgcgccggaacgcctgatgctggataacttccttgagcatttagcgcactggaatccg
gtgctgctggcggtggatgaagcgcactgtatttcgcagtggggacacgatttccgcccg
gaatatgccgcgctcggtcagcttcgtcagcgcttcccggcgctgccgtttatggcgctt
accgccacggctgacgacacgacccgtcaggatatcgtccgtcttcttgggcttaacgat
ccgtttagccaggttagcagcttcgatcgccccaacatccgctacatgctgatggaaaaa
ttcaaaccgctggatcagctcttgcgttacgtgcaggagcagcgcggcaaatcgggcatc
atttactgcaacagccgcgcgaaagtggaagacaccgccgcgcgtttgcaaacccgtgga
tttagcgctgcggcctatcatgccggattagaaaatcacattcgtgccgacgtgcaggag
aaattccagcgcgacgacctgcaaattgttgtcgccaccgtcgccttcggaatgggcatc
aataagcccaacgtgcgctttgtggtgcatttcgacatcccgcgcaatatcgaatcctac
tatcaggaaacgggccgtgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcctggctgcgtcgctgtcttgaagagaaaccgcaagggcagatg
ctggatatcgagcgtcacaagctcaacgcgatgggtgcgtttgccgaagcgcaaacctgc
cgccgtctggtgctgctcaactactttggcgaaggacgtcaggagccgtgcggtaactgc
gatgtctgcctcgatccgccgaagcagtacgatggcttaatggatgcacgtaaggcgctg
tcgactatcgggcgcgtcaatcagcgcttcgggatgggctatgtggtggaagtcctgcgc
ggggcgaacaaccagcgtatccgcgaaatgggccacgataaattgcctgtctacggcatc
ggcaaagagcaaagccacgagcactgggtgagcattattcgccagctgattcacctgggt
ttcgcgacacagaatattgcccagcactctgcgcttcagctgaccgaagccgcacgtccg
gtgctgcgcggtgatatcgagctccagctcgccgtgccacgcgttatcgccctgaaacca
cgcgtgatgcagaaatcctacggcggaaactacgaccgcaagctgttcgccaaactgcgc
aagctgcgtaaagccattgccgatgaagagaacattccgccgtatgtggtgttcaacgat
gcaacgcttatcgaaatggccgagcagatgccgctcagcgccagcgaaatgctcagcgtc
aacggtgtcggtacgcgcaaactcgagcgctttggtaaagagtttatggcgctgattcgt
tcacatgccgacggtgatgatgaggagtag
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