Enterobacter sp. 638: Ent638_4003
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Entry
Ent638_4003 CDS
T00507
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ent
Enterobacter sp. 638
Pathway
ent03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ent638_4003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ent03021
]
Ent638_4003
03019 Messenger RNA biogenesis [BR:
ent03019
]
Ent638_4003
Transcription machinery [BR:
ent03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Ent638_4003
Messenger RNA biogenesis [BR:
ent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ent638_4003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABP62658
UniProt:
A0A9J9GJI6
LinkDB
All DBs
Position
complement(4340554..4341813)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaac
atgggccttgaaaaccaggctcgtatgcgcaagcaggacatcatttttgccatcctgaag
cagcatgctaagagtggcgaagatatctttggcgacggtgtactggagatattgcaagac
ggatttggtttcctccgttctggagacagctcctacctcgccggtcctgatgacatctac
gtatcccctagccaaatccgccgtttcaacctccgtactggtgacaccatttcaggtaag
attcgtcctcctaaagagggtgaacgctactttgcgctgttgaaagttaacgaagttaac
tacgataaacctgaaaactcgcgcaataagatcctgtttgaaaacttaacgccgctgcac
gcgaactctcgcctgcgcatggagcgtggtaacggttctaccgaagacctgacggctcgc
gttctggatctggcgtctccaattggtcgtggtcagcgtggcctgatcgtggcaccaccg
aaagcaggtaagaccatgctgctgcagaacatcgcgcagagcattgcttacaaccatcct
gattgcgtactgatggttctgctgatcgatgagcgtccagaagaagtaacagagatgcag
cgtctggtgaaaggtgaagtgattgcatctacctttgatgagccagcctctcgccacgtt
caggttgctgaaatggttatcgagaaagctaagcgtctggtcgagcacaagaaagacgtt
attattctgctcgactccatcactcgtctggcgcgtgcttacaacaccgtagttcctgct
tccggtaaagtactgaccggtggtgtggatgcgaacgcattacaccgtccgaagcgtttc
tttggtgccgcgcgtaacgttgaagagggaggaagcctgacgattatcgcaaccgctctg
gttgataccggctctaaaatggatgaagttatctacgaagagtttaaaggcaccggtaac
atggagctgcacctggcacgtaaaatcgccgagaagcgcgtcttcccagcgattgattac
aaccgttcagggacgcgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgtaagatcattcacccgatgggcgaaatcgacgcaatggagttcctcatc
aataagctggcaatgacaaagaccaacgatgatttcttcgacatgatgaaacgctcgtaa
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