Enterobacter sp. Crenshaw: NWV12_17725
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Entry
NWV12_17725 CDS
T11440
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
entc Enterobacter sp. Crenshaw
Pathway
entc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
entc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NWV12_17725 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
entc03400
]
NWV12_17725 (recD)
Enzymes [BR:
entc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NWV12_17725 (recD)
DNA repair and recombination proteins [BR:
entc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NWV12_17725 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_28
AAA_16
UvrD_C
MukB
T2SSE
CbiA
ATPase
SRP54
NPHP3_N
DEAD
DO-GTPase1
NTPase_1
AAA
Motif
Other DBs
NCBI-ProteinID:
UVH62546
LinkDB
All DBs
Position
complement(3728055..3729875)
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AA seq
606 aa
AA seq
DB search
MTMQALLLDAVEQRLLRHLDVQFAMMVAGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVD
EKMPPALQACFALLGDEVDWQGILLGSPAVSGADTGTPMILVGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQTLDTLFTSDDATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQKCRIRLAAPTGKAAARLTESLGGALQKLPLTGDQLALFPNEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTYASLGYTAERAQELARLTGCSLTSENHSLAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRRTTTAVFDGTFTDIEKKSLQNGEEYQAMLDDAQQGYQHFLTG
VQQQSTPEQVIAAFGEYQLLCALREGPFGVRGLNDRLEQLLAQKRKINRTLHSRWYEGRP
VMISRNDSALGLFNGDIGIALDCGQGLRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELIYTAITRARQRLSLYTDERVLVQAIATRTERRSGLG
AIFESL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggcgctactgctggacgcggttgaacaacggttactgcgtcacctggat
gtgcagttcgccatgatggtggcaggcgaggagcctgccgtcatgctggccgcagccatt
ctgagcaaagacgcgggggaagggcacgtatgtctgccgctgtcgcgtctggcggtggat
gagaaaatgcctccggctttacaggcgtgtttcgcgctgctgggtgacgaagtggactgg
caggggatattactcggctcgcctgccgtgagcggagccgataccgggacgccgatgatc
cttgtcggcgagcgtttgtatcttaaccggctgtggcgtaacgaactgacggtagcgcgc
ttcttcagcgagaccaacgccccgcttccctgcgatgaagcgcagctccggcaaacgctg
gatacgctgtttacctctgacgacgcgacagactggcaaaaagtggcggcagccgtggcc
ttaacgcgacggatctcggtgatttctggtggcccgggcaccgggaaaacgaccactgtg
gcaaaactgcttgccgcgctgattcagctatcgggtgagcaaaagtgccgtattcgcctg
gcggcccccaccggtaaagcggcggcacgtctgacggagtcgttaggcggcgcgctgcaa
aaactgccgctaaccggggatcagcttgcgcttttccccaatgaggcgagcacgctgcac
cgtttgcttggcgcacagccgggtagccagcgtctgcgctatcatgccggtaacccactg
caccttgacgtgctggtcgtggatgaagcgtcgatgattgacctgacgatgatgtcgcgt
ttgatcgatgcgctgccgccgcacgcgcgcgtcattttcctcggcgaccgcgaccagctt
gcctccgtagaggcgggagccgtattgggggatatctgcacctatgccagcctgggatat
accgcggaacgcgcgcaggagttagcccgtctcaccggatgttcgctcacgtctgaaaac
cattcgcttgcaggggcgctgcgcgacagcctgtgtctgctgcaaaaaagctaccgtttc
ggcagcgactccggcatcggccagcttgcggcggcggtgaaccggggcgaccggcgcacc
accacagcggtatttgacggtacctttacggatattgagaaaaaatcgctgcaaaacggg
gaagagtatcaggcgatgctggacgatgcccagcaggggtaccagcactttctgacgggc
gtacaacagcaaagtacgccggagcaggtcattgccgcgtttggcgaataccagctgcta
tgtgcgctgagggaaggcccctttggcgtccggggtttgaacgacaggctggaacagctg
ctggcgcaaaaacgcaaaattaaccgcaccctgcactcgcgctggtatgaagggcgaccg
gtgatgatctcccgcaacgacagcgcgctggggttgtttaacggggatatcgggattgcg
ctcgactgcggtcagggcctgcgcgtctggttccagatgccggacgggagcgtgaagtcc
ttccagcccagccgtttgcccgagcatgaaaccgcctgggcgatgacggtgcataaatcc
cagggctccgagtttaaccatgcggcgctgatcctgcccacgcagctttcacccgtcgtt
acccgcgagctgatctataccgccattacgcgcgcgcgtcagcgtctttcgctctatacc
gatgagcgggtgctggtgcaggcgatcgccacccgaacggaacgccgaagcgggctgggc
gcgatatttgagtccctctga
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