Enterobacter sp. SES19: GXP72_19525
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Entry
GXP72_19525 CDS
T11023
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ente Enterobacter sp. SES19
Pathway
ente02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ente00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GXP72_19525 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ente03021
]
GXP72_19525 (rpoD)
Transcription machinery [BR:
ente03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXP72_19525 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QIR24495
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Position
4102744..4104591
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AA seq
615 aa
AA seq
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MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDTADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKDDVHRGLQKLHQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgcttgctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctctgttgccgagtacccg
gaagcgattacctatctgctggagcagtacgatcgcgttgaagcggaagaagcgcgcctg
tctgacctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgcctaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgatgacgaagacgaagatgag
gaagagagcgacgacgacaccgcggatgatgacaacagcatcgacccggagctggcgcgt
gagaagtttgccgagctgcgtacccagtacgaagtgacgcgtgacaccatcaaagcgaaa
ggccgcagccatgctgccgcacaggaagagatcctgaaactgtctgaagtattcaaacag
ttccgcctggtgccaaaacagttcgactacctggtaaacagcatgcgcgtgatgatggat
cgcgtacgtacccaggaacgcatcatcatgaagctgtgtgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaacgcg
gctatcgcgatgaacaagccatggtctgaaaaactgcacgacgtgaaggacgatgtgcat
cgcggcctgcagaaactgcatcagattgaagaagaaaccggcctgaccatcgagcaggtt
aaagatatcaaccgtcgtatgtccatcggtgaagcaaaagcccgccgtgcgaagaaagag
atggttgaagcgaacttgcgtctggttatctctatcgccaagaaatacaccaaccgcggt
ctgcagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctacgcaacctggtggatccgtcaggcg
atcacccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatttcccgccagatgctgcaggagatgggccgcgagccg
acgccggaagagctggccgagcgcatgctgatgccggaagacaagatccgtaaagtgctg
aagatcgccaaagagccaatctccatggaaacaccaatcggtgatgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgccaccaccgag
agcctgcgtgccgcaacgcacgacgtcctggccggcctgaccgcccgtgaagcgaaagtc
ctgcgtatgcgtttcggtattgatatgaacaccgaccacacgctggaagaagtgggtaaa
cagttcgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctg
cgtcatccaagccgctctgaagtgctgcgtagcttcctggacgactaa
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