Enterobacter sp. HNDS-6: ABFI50_04765
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Entry
ABFI50_04765 CDS
T11477
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFI50_04765 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_04765 (recD)
Enzymes [BR:
enth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABFI50_04765 (recD)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFI50_04765 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
MukB
T2SSE
ATPase
CbiA
UvrD_C
SRP54
DEAD
DO-GTPase1
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XBC89332
LinkDB
All DBs
Position
complement(1040209..1042029)
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AA seq
606 aa
AA seq
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MTMQALLLEAVEQRLLRHLDVQFAMMVAGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVD
EKMPPALQSCFALLGEAVDWQAILLRSPAVSATDTGTPLILTGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQVLDTLFTSDDATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQKCRIRLAAPTGKAAARLTESLGGALQKLPLTGEQLALLPNEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTYASLGYTAERAEELARLTGCSLAAEQHSIAGALRDSLCLLQKSYRF
GSDSGIGQLASAVNRGDRHTTCAVFDGTFTDIEKKSLQSGEEYQAMLDDALLGYQHFLTG
VQQQRPPEQVIAAFGEYQLLCALREGPFGVSGLNDRLEQLLAQKRKINRTLHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELIYTAITRARQRLSLYTDERVLMQAIATRTERRSGLG
AIFESL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggcgctattgctggaggcggtagaacaacgattattgcgccacctggac
gtgcagtttgccatgatggtggcgggcgaggagccagccgttatgctcgctgccgccatt
ctgagtaaggacgcaggcgaggggcatgtgtgccttccgctgtcgcgtctggctgtggat
gagaaaatgcctccggcgctgcagtcgtgtttcgcactgctcggtgaggcagtggactgg
caggcgatattactccgctcgcctgccgtcagcgcgaccgataccgggacgccactgatt
ttgaccggcgagcgtttgtatctgaaccgactctggcgtaacgaactgacggtggcgcgc
ttcttcagcgagaccaacgccccgcttccctgcgatgaagcgcagctccggcaagtgctg
gatacgctgtttacctctgacgacgcgactgactggcagaaagtggcggccgccgtggcg
ttaacgcggcggatctcggtgatttcgggcggcccgggcaccgggaaaacaacgacggtt
gcaaaactgcttgccgcgctgattcagttatccggtgagcaaaagtgtcgtattcgtctg
gcggctcccaccggtaaagccgcggcacgtctgacggagtcattaggcggtgccctgcaa
aaattgccgctcacaggggaacagcttgcgcttttacccaatgaagccagcacgttgcat
cggttacttggcgcgcagccgggtagccagcgtctgcgctaccatgccggtaacccgcta
cacctggatgtgctggtggtggatgaagcgtcgatgattgacctgacgatgatgtcgcgg
ctgatcgatgctttgccgcctcatgcgcgggtcattttcctcggcgaccgtgaccagcta
gcgtccgtggaagccggggccgtgctgggtgatatctgcacctatgccagtctgggttat
accgcggaacgcgcggaggagttggcccgcctgacagggtgttcccttgcggcggaacag
cactcgatcgcgggcgcgctgcgcgacagcttgtgcctgctgcaaaaaagctaccgtttc
ggcagcgactccggcatcgggcagcttgcgtcggcggtgaaccggggagaccggcacacg
acctgtgcggtgtttgacggtacctttaccgacattgagaaaaaatcgctgcaaagtggg
gaagagtatcaggcgatgctggatgatgccctgctggggtatcaacattttctcaccggc
gtacaacagcaacgtccgccggagcaggtgattgccgcgtttggcgaatatcagttgctc
tgcgcgttgagggaggggccgtttggcgtcagcggcctgaatgacaggctggaacagctg
ctggcgcagaaacgtaaaatcaaccgtaccctgcactcgcgctggtatgaagggcgcccg
gtgatgatttcccgcaacgatagtgcgctggggttgtttaatggcgatatcggcattgca
ctcgatcgcgggcaggggttgcgcgtctggttccagatgccggatggtagcgtgaagtcc
ttccagcccagccgtttgcccgagcatgaaactgcgtgggcgatgacggtgcataaatcg
cagggctctgagtttaaccatgcggcgctgatcctgccgacgcagctttcacctgtcgtt
acccgcgagctgatctataccgccatcacgcgtgcgcgtcagcgcctgtcgctgtatacc
gatgaacgcgtgctgatgcaggccatcgccacccgcacggaacgccgaagcgggctgggc
gcaatctttgagtctctctga
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