Enterobacter sp. HNDS-6: ABFI50_04770
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Entry
ABFI50_04770 CDS
T11477
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFI50_04770 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_04770 (recB)
Enzymes [BR:
enth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABFI50_04770 (recB)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFI50_04770 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XBC89333
LinkDB
All DBs
Position
complement(1042026..1045568)
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AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRTNIHELRIACLRQSTDNPLYASLLEEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLPRDIA
EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIARIADIKQKWNESV
GEIEAIIESSGIDRRKFNRGNQGKWIEKISAWAQEETRGYQLPDALEKFSQRFLVERTKA
DGIVPEHPLFVAIETLLAEPLTLNDLMITRAMTEIRDAVAREKRRRGELGFDDMLSRLDA
ALCSENGEALAEAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPGTALLLIGDPKQAIY
AFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNALFSRMDMAFMFREIPFLPVKF
APKNDSLRFEFNGETQPAMHFWLLDGEGCGVADYQNAMAQYCAAQIRDWLSAGARGDALL
WKGDKPAPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNARDIDVLNNDEAAWDAVVEEFVRYREKWQKRGVMAM
VRELMAERHIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL
SNAESSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGDKSGESDFHLSALGR
LIQRGEPKDAAGLRQCIESLCSEHVALHIPSQPDNSRWQTPEERASELHARQVARTIADD
WRVTSYSGLQQHGQSVAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWLRAVLHAPLTTQGISLSQLTAKDKQVE
MEFYLPIASPLRADALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGENSEAYTQQAMASAMQMHRYDLQYQLYTLALHRYLRHRMADYRYEDHFGGVIY
LFLRGVDANDPQSGVFSTRPDAELIEKMDNLFAARTEEVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttacctctacagggtgaacgattg
attgaagcctcagcgggaacgggaaaaacgtttaccattgccgcgctctatctgcgcctg
ctgttagggcttggcggtaacgctgcttttccgcgccctttgagcgttgaagagctgttg
gtcgtgacctttaccgaggccgccaccgctgagttgcgcggccgtattcgtaccaatatt
cacgaactgcgcatcgcctgcctgcgccagagtacggataaccctctctacgcgagcctt
ctggaagaaattgctgataagcagcaggccgcccagtggctgctccttgcggaacgacag
atggacgaagcgtccgtctttaccattcacgggttttgccagcgcatgctgagtctgaat
gcgttcgaatccggcatgctgtttgaacaacaactcattgaagatgaatccgtgctgcgc
tatcaggcctgtgcggatttctggcgtcgccactgctacccgttaccgcgcgatatcgcc
gaagcggtacatgccttgtggaaagggccagaggcactgctgcgtgccatcgatcgttat
cttcagggggaagcgccggtcatcaaatcgccgccgccagcggatgaaaccctggcctca
cgccatgaaaaaatcatcgcgcgaatcgcagacatcaagcaaaaatggaatgaatcagtc
ggcgagattgaggcgatcatcgagagttccgggatcgacagacgcaagttcaaccgtggc
aaccaggggaaatggatcgagaagatcagcgcatgggcgcaggaagagacgcgcggttat
cagcttccggacgcgctggagaaattctcacagcgtttcctggttgagcggaccaaagcc
gacggcattgtgcctgaacatcccctgtttgtggcaattgaaactctgctggcggagccc
ctgacgcttaacgatctgatgatcacccgtgcgatgacggaaattcgcgatgccgtggcg
cgcgaaaagcgccggcggggcgagctgggttttgatgacatgctgagtcgccttgatgcg
gcgttgtgcagcgaaaatggcgaagcgcttgcagaggcgattcgtactcgcttcccggtc
gcaatgattgacgagtttcaggataccgatcctcagcagtaccgtattttccgccgtatc
tggcgccatcagcccggcaccgcactgctgttaatcggcgatccgaagcaggccatttac
gctttccgcggtgcggatattttcacctacatgaaagcccgcagtgaggttgatgcgcac
tatacgctcgataccaactggcgatcctctcccggcatggtggaaagcgttaacgcgctg
ttcagtcgcatggatatggcgtttatgttccgggaaatcccgtttctgccggtcaaattt
gccccgaaaaacgattcgttgcgcttcgaattcaacggtgagacgcagcccgccatgcac
ttctggctgctggacggagaaggctgtggcgtcgccgactatcaaaatgccatggcccag
tactgtgcggcgcagattagggactggctcagcgcaggcgcgcggggagatgcgctgctg
tggaagggcgataaacccgcgccggtaaaagcatccgatatcacggtgctggtgcgaagc
cgccaggaggccgcgcttattcgcgacgccctgacgctactgaatattccgtccgtctat
ctttccaaccgcgacagcgtttttgaaacgctggaagcccaggagatgctttggctgctg
caggccgtgctggcgccagagcgtgaaagtacgctgcgcagtgcactggcgagtgcgatg
ctcgggctgaatgcgcgtgatattgatgtgctcaacaatgacgaagccgcgtgggatgcc
gtggtagaagagtttgttcgctaccgcgaaaaatggcaaaagcgcggcgtgatggcgatg
gtgcgtgagctcatggcagagcgtcacattgcggagaacatgctcgcaaccgcgggcggt
gagcgccgtctgaccgatattctgcatatcagcgaattgctgcaggaagcggggacacag
ctggagagcgagcatgccctggtgcgctggctggcgcagcagattgccgacccgaacagt
aattcgtccagccagcagatgcgccttgagagtgataaacacctggtgcaaatcgtcacc
attcacaaatcgaaaggcctggaatacccgctggtctggctgccctttatcgccaattac
cgcgtgcaggatcaggctttttaccacgatcgcgagtcgtttgaagcggtactcgatctc
agcaacgcagagtcaagcgttgagctggccgaagccgagcgtctggcagaagatctgcgt
ctgctttatgtggcgctgacccgctcggtctggcactgcagcctgggcgttgcgccgctg
tttcgtcgccggggcgataagagcggcgagagtgattttcatctgagtgcgctgggaagg
cttatccagcgaggcgaacccaaagatgctgccggtctgcgccagtgcatcgaatctctt
tgctcagagcatgttgccctgcatattccgtctcagcccgacaacagccgctggcagacg
ccggaagagagagcgtcagagctgcatgcccgccaggttgcccgcacgattgccgacgac
tggcgcgttaccagttactccggtttacagcagcacgggcaaagcgttgctcaggatttg
atgcctaaactggacgtagatgctgcaggcgcaggaagcgtgcccgctgaaccggtgctc
acaccgcatcagttcccgcgtggggcctcgccgggcacgtttttacacagcctgtttgaa
gagctggattttacccagccggtctctgaagaatgggtgctgaagatgctccagagcggc
ggctacgacgcccaatggcagccggttctcaccgactggctccgcgctgttttgcacgcg
ccgctcacgacacaggggatttccctcagccagctgaccgccaaagataaacaggtcgaa
atggagttttatctccccatcgccagcccgctcagggccgacgcgcttgacgcgttgatc
cgtgagtacgatccgttatccgccgggtgcccaccgctcaacttccgccaggttcagggg
atgctaaaagggttcatcgacctggttttccgccacgaagggcgctactacctgctggat
tacaaatcgaactggctgggtgagaacagcgaagcctatacccaacaggcgatggcctca
gcgatgcaaatgcatcgctacgacctacagtatcagctctataccttggcgttgcaccgg
tacctgcgccatcgcatggccgattaccgttacgaagaccattttggcggcgttatttac
ctgttcctgcgcggcgtggatgctaacgacccgcagtcgggcgtttttagcacccgtccg
gatgcggagctgattgaaaaaatggataacctgtttgctgcacgcacagaggaggtggca
tga
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