Enterobacter sp. HNDS-6: ABFI50_04780
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Entry
ABFI50_04780 CDS
T11477
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFI50_04780 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_04780 (recC)
Enzymes [BR:
enth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABFI50_04780 (recC)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFI50_04780 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XBC89335
LinkDB
All DBs
Position
complement(1048713..1052087)
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AA seq
1124 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMVLVQSTGMAQWLQMSLSRKFGIAANI
DFPLPASFIWEMFVRVLPDIPEQSAFNKQSMSWKLMALLPEMLQHDEFAMLRHYLNDDTD
KRKLFQLASRTADLYDQYLVYRADWLIRWEAGERVEGLPEAQIWQAPLWKALVEHTEKLG
QPKWHRANLYDRFISILENASERPARLPSRVFICGISALPPVYLKALNALGKHIDIHILF
TNPCRHYWGDILDERWLSRLVTRQRKRLFEERSVPLFKDGSTAAQLFDEDGIQNLPNPLL
ASWGKLGRDYIHMLSDITSSGEGDVDAFVEIAPDNLLHNIQLDILDLENRAVMGVTAKEF
ERSDSKRQLDADDRSITIHVCHSPQREVEVLHDQLLAMLQDDPELTPRDIVVMVADIDSY
SPFIQAVFGSATGERYLPYAISDRRARQSHPALQAFVTLLSLPDSRFISEDVLALLDVPV
LAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEFELPPTGQHTWRFGLTRMLLGYAME
SSQGEWNEVLPYDESSGLIAELVGHLASLLMQLNRWRRELMQPRPLEEWLPVCRALLNDF
FLPDSDTEAAMALIETQWQAIVDEGVNSHYHEAIPLSLLRDELTQRLDQERISQRFLAGP
INICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSANPKRGDRSRRDDDRYLFLE
ALISAQSKLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLAGDEALNCDESEQRVKA
HITCVHSRMPFDPMNYVVSEQQSYAREWLPAAKKEGRAHTDFIQTLDPLPINTLTFEQLQ
CFWAHPVRAFFQQRLQVNFRSEESEIPDAEPFTLEGLERYQLNLQLLNALVDEEDADKLY
RRYRAAGQLPYGAFGEIVWEAQCQEMNALAERVREQRQPGQSLEIDLSCNGIQLTGWLTQ
VQPDGLLRWRPSLLSVSQGLQLWLEHLVYSALGHKGESRIFVRKEGEWRFPPMEAEQAFR
YLSLYIEGYLQGMNKPLLLLPESGGAWIKACYDAQNDAMLTDEASLQKARSKFIQAYEGN
MMVRGEGEDVWYQRLWRTLEPEYFEAITEEAKRYLLPLFKFNQS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactcaaatcgtctggatgtgctggaagcgctgatggaatttatc
gttgagcgcgagcggctggacgacccttttgagcctgaaatggtgctggtgcaaagcacc
ggtatggcgcagtggctgcaaatgtcgctttcccgtaaatttggcattgccgcgaacatt
gattttccgctgccggcgagctttatctgggaaatgtttgttcgcgtattgccagacatt
cccgagcagagcgccttcaacaagcagagcatgagctggaagctgatggcgctgctgccg
gaaatgctgcagcacgatgaattcgccatgctgcgccactatctcaatgacgataccgat
aagcgcaagctgttccagctggcgtcccgtaccgccgatctctacgaccaatatctggtt
taccgtgctgactggttaattcgctgggaagcgggtgagcgggttgaagggctaccggag
gcgcaaatctggcaggcgccgctgtggaaagcgctggttgagcatacggagaaactgggc
cagcctaagtggcaccgtgccaatttgtacgatcggtttatctcgatactcgaaaatgcg
tcggagcgcccggcccgtctgccgtcacgcgtctttatctgtgggatatccgcattaccc
cctgtctatctgaaggcgctgaatgcgctgggtaaacatattgatattcatattttgttt
accaacccctgccggcactattggggggatatcctcgatgaacgctggctttcacgactg
gtaacccgccaaagaaagcgcctttttgaagagcgatccgtccctttgtttaaagacggc
tccaccgccgcgcagcttttcgatgaagacggtattcagaacctgcccaatccgctgctt
gcctcatgggggaagctgggacgtgattacattcacatgctctctgatatcacttcatcg
ggtgaaggcgatgtggatgcttttgtcgagatcgccccggataacctgctgcataacatt
cagctcgatattcttgatctggaaaaccgtgccgttatgggcgtgacggcgaaagagttt
gaacgcagcgacagcaagcgtcagctggacgctgacgatcgtagtatcacgatccatgtg
tgccatagcccgcagcgtgaggtcgaagtgcttcacgaccagttgctggcgatgctgcag
gacgatcccgaactcacgccgcgtgacatcgtggtgatggtggcagacatcgatagctac
agcccctttattcaggctgttttcggcagtgcgacaggggagcgatacttgccttacgct
atctctgaccgtcgcgctcgtcagtcgcatcccgccttgcaggcctttgttaccctgctt
tcactgccggatagccgcttcatctcggaagatgtcctggcgttactggatgttcccgtg
ctggccgcacgcttcaacatcaatgaggaagggctgcgctaccttcgccagtgggtgaat
gaatctggcgtgcgctgggggattgatgacgacaacgtccaggagttcgagcttcctccg
accgggcaacatacctggcggtttggcctgacgcgtatgctgctgggctacgccatggaa
agcagccagggcgagtggaatgaggtgctgccatacgatgagtccagcggtttgattgct
gaactggtggggcatttagcgtctctgctgatgcagcttaaccgctggcgtcgtgagtta
atgcagccgcgtccgcttgaagagtggcttccggtttgcagggcgttgctcaatgatttc
ttcctgccagacagtgacaccgaagcggcgatggcgctcattgaaacgcagtggcaggct
atcgtcgacgagggcgtgaattcccactatcacgaggcgattccattgtcgctgctgagg
gacgaattgacgcagcgtcttgaccaggagcgaatcagtcagcgtttcctggcgggccca
atcaatatctgcacgctgatgccaatgcgttcaatcccctttaaggtggtctgtttgctc
ggcatgaatgacggcgtttatcctcgcgccctggcgccgctggggttcgatttaatgagc
gcaaatccaaagcggggtgaccgtagtcgtcgtgatgatgaccgctatcttttcctcgaa
gcgctcatctctgcccagagtaagctctatatcagctatatcggccgctccattcaggat
aacagcgagcgcttcccctccgttctggtgcaggagttagtggattatatcggccagagc
cactatctggcgggtgatgaagcccttaactgtgatgaaagcgaacagcgggtcaaagcg
catatcacctgtgtccacagccgtatgccgtttgacccgatgaactacgttgttagcgaa
cagcagagctatgcccgcgagtggctaccggcggcgaaaaaggaggggagagcacatacg
gatttcattcagacacttgacccgctgcccattaacaccctgacttttgaacagcttcaa
tgcttttgggcgcatcctgttcgcgccttcttccagcaacgattgcaggtcaacttccgt
tctgaagagagcgaaattccggatgcagaaccttttacgctggaagggctggagcgctat
cagttaaatctgcaactgctgaatgcactggttgacgaggaagatgccgacaagctttat
cgccgctatcgtgcggcagggcaactgccttatggcgcgtttggggagatcgtctgggag
gcgcaatgccaggagatgaacgctctggcggagcgcgtaagggagcagcgtcagcccgga
caaagtcttgaaatcgatctcagctgcaatggcatccagctcaccggctggctcactcag
gttcagcctgatgggctgctgcgctggcggccttcactgctcagcgtttcacagggattg
caactctggctggaacatcttgtctacagtgcgttgggccataaaggcgaaagccggatt
ttcgtgcgcaaagagggcgagtggcgctttccgccaatggaggcagagcaggcgtttcgc
tacctctctttgtacattgaaggctatctccagggaatgaacaaacctctgctgttattg
cctgaaagtggtggtgcgtggataaaagcctgttacgacgcacagaatgatgcgatgtta
acggatgaggcttctctgcagaaagcgcgcagtaaatttatacaggcctatgaagggaac
atgatggtgcgcggcgagggggaagatgtctggtaccagcgcttatggcgcacgctcgaa
ccagagtactttgaggctatcacggaagaggcaaagcgctacctgttaccgttgtttaaa
tttaatcagtcctga
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integrated database retrieval system
