Enterobacter sp. HNDS-6: ABFI50_05010
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Entry
ABFI50_05010 CDS
T11477
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03410
Base excision repair
enth03430
Mismatch repair
enth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFI50_05010 (recJ)
03430 Mismatch repair
ABFI50_05010 (recJ)
03440 Homologous recombination
ABFI50_05010 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_05010 (recJ)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABFI50_05010 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABFI50_05010 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABFI50_05010 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XBC89379
LinkDB
All DBs
Position
complement(1097179..1098912)
Genome browser
AA seq
577 aa
AA seq
DB search
MKAPIKLRRREAVEPVDLPDDLPPLLKRLYASRGVRSAEDLERSVKGMLPWQQLNGIEKA
IEMLYNALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPDAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAIPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSGETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTDWIDPALLQGEVVSDGELSPHEMTMD
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTA
IWPDNGVREVELAYKLDINEFRGNRTLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccccgataaaattgcgccgccgcgaggcggttgaaccggttgatttgccagac
gatctcccgcccctgctgaagcgtctctacgccagccgcggcgtgcgcagtgctgaggat
cttgaacgcagcgtcaaagggatgctgccctggcagcagctcaacggcatcgaaaaagcc
atcgaaatgctctacaacgcgctccgtgagggaacgcgtattgtggtggtaggggatttc
gatgcagatggcgcaaccagcacggccttgagcgttttgagtctgcgcgcgctgggctgc
gataacgtcacttaccttgtgccgaaccgctttgaagacggttacggcctcagcccggaa
gtggtcgatcaggctcacgcccgcggggcacagatgatcatgaccgttgataacgggatc
tcttcccatgcaggtgtcgatcatgcgcacgcgctggggatcccggtgttggtcaccgat
caccacttgccgggtgaaacattgccggacgctgaagcgatcatcaatcccaacctgcgc
gactgcgatttcccgtcaaaatctctcgccggtgtgggggtagcgttttatctgatgctg
gcgctgcggaccctgcttcgtgataagggctggttcgaatcacgcggtatcgccatacca
aacctggccgaatatctcgacctggtggcgctgggtaccgtcgcggacgtcgtgccgctc
gataccaataaccgtattttgacctggcagggcttaagccgcattcgcgcgggcaagtgc
cgtccggggattaaggcgctgctggaaattgccaaccgcgatccgctcaagctggcggca
agtgatttgggttttgccctcggcccgcgtctgaacgctgccggaaggctggacgatatg
tccgtcggtgtggcgctgctgctgtgcgataacatcggcgaagcgcgcgtcctggccaat
gagctcgacgcgttgaaccagacccgtaaagagatagagcagggaatgcaggtcgaagcg
ctgaccctttgcgaaaaactcgaacgcagcggtgaaacgctgccgggcgggctggcgatg
tatcatcctgagtggcatcagggtgtggttggcattctggcctcgcgcattaaagagcgc
ttccaccgcccggtgatcgcgtttgccccggctggtgacggcacgctgaaaggctctggc
cgttcgattcagggtcttcacatgcgtgatgcactggagcgtctggatacgctgtatccg
ggcctgatgatcaaatttggcggccatgcgatggcggcgggtctgtcgctggaagaggcg
aaatttgacgaatttcagcggctatttggtgaactggtcaccgactggattgaccctgcc
ttgttgcagggagaagtggtgtccgacggcgagctctcaccgcatgagatgacaatggac
gtggcgcagatgctgcgcgatgccggtccgtggggacagatgttccctgaaccgctgttc
gacggccgtttccgcctgcttcagcaacgtatcgtcggcgagcgtcatctgaaagtcatg
gttgagcccgttggcggtggaccgctgctggacggcatcgccttcaacgtcgatacggcc
atctggccggacaacggcgtgcgcgaggtcgaactggcatacaaactggatatcaacgag
tttcgcggaaaccgcacccttcagatcatcatcgacaatatctggccaatttag
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