Enterobacter sp. HNDS-6: ABFI50_08360
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Entry
ABFI50_08360 CDS
T11477
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABFI50_08360 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enth03021
]
ABFI50_08360 (rho)
03019 Messenger RNA biogenesis [BR:
enth03019
]
ABFI50_08360 (rho)
Transcription machinery [BR:
enth03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ABFI50_08360 (rho)
Messenger RNA biogenesis [BR:
enth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABFI50_08360 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XBC89989
LinkDB
All DBs
Position
complement(1782803..1784062)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcatgctaagagtggcgaagatatctttggcgacggtgtgttggagatattgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctcctaaagagggtgaacgctactttgcgctgttgaaagtcaatgaagttaac
tttgacaagccagaaaactcacgtaacaagatcctctttgagaacttaacgcctctgcac
gcgaactctcgcctgcgcatggagcgtggtaatggttcaacggaagacttaaccgcgcgt
gttctggatctggcatcgccaattggtcgcggccaacgtggtctgatcgtggcaccgcca
aaagcgggtaaaacgatgctgctgcagaatatcgcgcagagcatcgcctataaccacccg
gactgcgtactaatggtactgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagtggttgcttctacctttgacgaacccgcctctcgtcacgtt
caggtcgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgactccattacccgtctggcacgtgcttacaacaccgtggttccggct
tccggtaaagtactgaccggtggtgtggacgccaacgccctgcaccgtccgaaacgcttc
ttcggtgcggcacgtaacgtcgaagagggcggcagcctgaccatcatcgcaacggcgctg
atcgataccggctccaaaatggacgaagtgatttacgaagaatttaaaggtacaggtaac
atggaactgcacctttctcgtaagatcgctgaaaaacgcgtcttcccggcaatcgactac
aaccgttccggtacccgtaaagaagagctgctcactactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggtgaaatcgacgcaatggaattcctcatt
aacaaactggcgatgaccaaaacgaacgacgatttcttcgatatgatgaaacgctcgtaa
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