Enterobacter sp. HNDS-6: ABFI50_10680
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Entry
ABFI50_10680 CDS
T11477
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABFI50_10680 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_10680 (uvrA)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABFI50_10680 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABFI50_10680 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
nSTAND3
Viral_helicase1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
XBC90414
LinkDB
All DBs
Position
complement(2286004..2288826)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHAKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAVVSDMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDKRNFYYFQMLKSLAEHYKFDVEAPWASLSPNVHKVILFGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCATCEGTRLRREARH
VFVENTALPTISDMSIGHAMDFFNDLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLVHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLKDIMAVPESLTGQYMSGKRKIEV
PKQRVAADPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQT
ALNGATLAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
ARSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPLL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccacaatctcaaaaatatcaacctcata
atccctcgcgacaaactcatcgtcgtgaccgggctttcggggtctggcaaatcctcactg
gctttcgacaccttgtatgccgaaggacagcgtcgttacgttgaatctctctctgcgtac
gcgcgtcagttcctgtcgctgatggaaaaaccggatgtcgatcatattgaagggttatcg
cctgcgatctccatcgagcagaagtcgacttcgcataacccgcgttcaacggtcggtacc
attactgaaattcacgactacctgcgtctgctgtatgcgcgcgtgggtgagccgcgctgc
ccggaccacgacgtcccgctggcggcgcagaccgtgagccagatggtggataacgtgctg
tcgcagccggaaggcaaacgcctgatgctgttggcgccaattattaaagagcgtaaaggc
gaacacgccaaaacgctggagaacctggcaagccagggctatatccgcgcccgtattgac
ggcgaagtgtgcgacctgtcggatccgccaaaactggagctgcagaaaaagcacaccatt
gaagtggtgatcgatcgctttaaggtgcgtgaagacctcgcgacgcgtcttgcggaatcg
ttcgaaacggcgctggaactctccggtggtaccgccgttgtttccgatatggacgacccg
aaagcggaagagctgctcttctccgccaactttgcctgcccgatttgcggctacagcatg
cgcgagctggaaccgcgtctgttctcgttcaacaacccggcaggcgcatgcccaacctgc
gacggcctgggcgtacagcagtatttcgacccggaccgcgtgatccagaaccctgagctg
tcgctggcaggcggcgccattcgcggctgggataagcgtaacttttactacttccagatg
ctgaaatcgctggcggagcactataagttcgacgtggaagccccgtgggccagcctgagc
ccgaacgtgcacaaagtgatcctgttcggttccggtaaagagaacatcgagttcaaatac
atgaacgatcgcggtgatacctccgtgcgtcgccacccgttcgaaggggtgctgcacaat
atggagcgccgctacaaagagaccgaatccagcgcggtacgcgaggagctggcgaagttc
atcagcaaccgctcctgtgccacctgtgaaggcacgcgtctgcgtcgcgaagcgcgtcat
gtctttgtcgaaaacacggcgctgccgaccatctcagacatgagcatcggccacgcgatg
gacttcttcaacgacctgaagctctccggtcagcgcgctaaaatcgctgaaaaagtgctg
aaggagattggcgatcgtctcaagttcctggtgaacgtgggtctgaactacctgacgctt
tcccgctcggcagaaacgctgtccggcggtgaggcccagcgtatccgcctggccagccag
attggcgcaggcctggtgggcgtgatgtacgtgctggatgagccgtcaatcggcctgcac
cagcgcgacaacgaacgtctgctcggcacgttggtccacctgcgcaacctcggtaacacg
gtgattgtggtggagcacgacgaagacgcgattcgcgctgcggatcacgtgatcgacatt
ggtcctggcgcgggcgtacacggcggtcaggtggtcgcggaagggacgctgaaagacatt
atggcggtacccgagtcgctgaccggccagtacatgagcggcaagcgtaagattgaggtg
ccaaaacagcgcgtagcggcagatccggaaaaagtgctgaagctgaccggcgcgcgcggc
aacaacctgaaagatgtgacgctgacgctaccggttggcctgtttacctgcatcactggc
gtgtccggttccggtaaatcgacgctgattaacgataccctgttcccgattgcgcagacg
gcgctgaacggtgcgacgctggccgagcccgcgccgtaccgagacattcaggggctggaa
catttcgataaggttatcgacattgaccagagcccgattggccgaacccctcgctcgaac
ccggcgacctataccggcgtcttcacgcccgtacgtgaactgttcgccggcgtgccggaa
gcgcgttcacgcgggtacacgccgggacggttcagctttaacgtgcgcggcggccgctgt
gaagcgtgccagggcgatggcgtcatcaaagttgagatgcacttcctgccggacatctac
gtcccgtgcgaccagtgcaaaggtaaacgctataaccgcgaaacgctggaaattaagtac
aaaggcaagaccatccacgaagtgctggacatgaccatcgaagaggcgcgcgagttcttt
gacgccgtccctgcgctggcgcgtaagctgcagaccctgatggacgtcggtctgacctac
attcgtctggggcagtccgccactacgctgtcgggcggtgaagcccagcgcgtgaagctg
gcgcgtgagctctccaaacgcggcaccggtcagacgctgtatattctggatgagccgact
accggtctgcactttgcggatatccagcagttgctcgacgtgctgcatcagctgcgcgat
cagggcaacacgattgtggtcatcgaacataatctggacgtgattaaaacggcggactgg
attgtcgatctcggcccggaaggcggcagcggcggcggtgaaatcctcgtctccggtacg
ccagagaccgttgcagagtgcgaagcctcgcacaccgcgcgcttccttaaaccgttgctg
taa
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