Enterobacter sp. HNDS-6: ABFI50_15820
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Entry
ABFI50_15820 CDS
T11477
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
enth Enterobacter sp. HNDS-6
Pathway
enth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
enth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABFI50_15820 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enth03400
]
ABFI50_15820 (uvrB)
DNA repair and recombination proteins [BR:
enth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABFI50_15820 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABFI50_15820 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
AAA_22
DUF8810
Motif
Other DBs
NCBI-ProteinID:
XBC87330
LinkDB
All DBs
Position
3378993..3381008
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESVIQR
FTIYPKTHYVTPRERIVQAMEEIKVELAERRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRAAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKARSVVEEDTVVLTPKALQQKIHELEAQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattctgctttccgtccatctggcgatcagcctgaggcg
atccgtcgtctggaagaggggctggaagatgggcttgcgcaccagacgctgctgggggta
accggttccggtaaaacgttcaccatcgctaacgtgatcgcggatcttcagcgccctacg
atggtgcttgcccccaacaaaaccctcgcggcacagctttacggcgagatgaaagagttc
ttcccggagaacgccgttgagtatttcgtctcctactacgattactaccagccggaagcc
tatgtgccgagctctgacaccttcatcgagaaagatgcctcagtgaacgaacacatcgag
cagatgcgactgtcggcgaccaaggcgcttctggagcgtcgcgatgtggttgtggtggcg
tcggtttcggcgatttacggcctgggcgacccagacctctatctgaagatgatgctccac
ctgacgcaggggatgatcatcgatcagcgtgcgattttgcgccgactggcggagttgcag
tacacccgtaacgaccaggcatttcagcgcggaacgttccgcgtgcgcggggaggtgatc
gacatcttcccggcggaatcggacgatatggcgctgcgcgttgagctgtttgatgaagag
gttgaacgtttatcgttgtttgacccgctaaccggtcacgttgagtcggtgatccagcgt
tttaccatctaccctaaaacgcactacgtgacgccgcgcgagcgtatcgtgcaggcgatg
gaagagatcaaagtggagctggctgaacgccgtaaggtgcttctggcgaacaataagctg
ctggaagagcagcgcctgagccagcgaacccagttcgatctggagatgatgaacgagctc
ggctactgctccggtattgaaaactactcccgtttcctctcaggtcgtgggccgggtgag
ccgccgccgacgctttttgactacctcccggccgacggcttgctggtgatagacgaatcc
cacgtcaccattccgcagattggcgggatgtaccgcggtgaccgcgcgcgtaaagagacg
ctggtggagtacgggttccgtctgccgtcggcactggataaccgtccgatgaagtttgaa
gagtttgaggcgctggcgccacagactatttacgtgtcggccacgccgggcaactacgag
ctggagaaatcgggcgatgaggtgattgatcaggtggttcgtccgaccgggctgctggat
ccgattatcgaagtgcgtccggtggcgacccaggtggacgatctgctctctgagatccgc
aagcgtgccgccatcaacgagcgtgtgctggtaaccacgctcaccaagcgtatggcggaa
gatctgacggagtatctggaagagcacggcgagaaggtgcgttatctgcactcggatatc
gataccgtggagcgtatggagatcatccgcgatctgcgtctgggtgagtttgacgtgctg
gtagggatcaacctgttgcgagaggggctggatatgccggaagtctcgctggtggcgatt
ctggacgcggataaagagggcttcctgcgttccgagcgctcgctgatccagaccattggc
cgcgccgcgcgtaacgtcaatggcaaagcgattctctacggcgataaaattaccccgtcg
atggcgaaagcgattggcgaaacggaacgccgccgtgagaaacagcagcgctataacgaa
gagcacggcattacgccgcaggggctgaacaagaaagtggtggatattctggcgctcggt
cagaacattgcgaagaccaaagcgaaaggccgcggcaaggcgcgttccgtggtggaagaa
gataccgtcgtactgacgccgaaagcgctgcagcagaagatccacgagctggaggcgcag
atgatgcagcacgcccagaacctggagttcgaagaggcggcacagatccgcgatcagctt
catcagctgcgggatttgtttatcgcggcatcgtga
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integrated database retrieval system
