Enterobacter sp. JJBC: RY075_05280
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Entry
RY075_05280 CDS
T11441
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
entj Enterobacter sp. JJBC
Brite
KEGG Orthology (KO) [BR:
entj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
entj03400
]
RY075_05280 (sbcC)
DNA repair and recombination proteins [BR:
entj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY075_05280 (sbcC)
Archaeal homologous recombinant proteins
RY075_05280 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
nSTAND_NTPase5
ABC_tran
tRNA_m1G_MT
cobW
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWQ27148
LinkDB
All DBs
Position
complement(1097554..1100685)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQAQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNQPDGNLQAPRVELARCE
DGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVFEKHKAARNALEMCEAQAAGVVLLSEEQQQHLQQSLQALTDEEKILLAQQQ
SQQKDFQWLTRNDELIREQQRAAASQQQAQQALTDAAPQLAKLQLAQPAAQLRPLWQHQQ
EQTARLSQTAERIVEVNTRLLDRAAQRARIRNGAQRNREQLQTEHTALTQWLTEHDRFRQ
WGQEIAGWRAHFTQLNRDKNQLVAQAARMAELRQKLAELPESTLTLTAEDLATAMEQQAQ
SRALRQRLTALHARYQPLQKRLRQNAESVQKAQAEQGKLNETLILRRQQFKEKNQHYADL
KALCEREATIKDLENYRAQLEAGKPCPLCGSREHPAVVQYQALELTDNQRRRDALEKEVA
ALKEEGLLVLGQVNALTQQIQRETEEAQALSQEEQALTKEWLEVCTSLNIALNIQDDIAL
WMSAQEQYERQLYQLSQRLTLQNQLIEQEGQARQYQQQLTATRQALAASLESLSLSVPDE
GAESAWLSARESEYTLWQEKQAQHGTIQERINALMPILETLPVTDDTEADAVIPEKWRGI
HDECVSLQSQLTTLQQQETLERERLQQSQAQFNAALTASCFADREAFLSALLDEASIRQL
EQQKQTLENQLQQTTALSVQASQQLQAHQAQRPEGLETDAATLQAQLHQLAQQLRDNTTH
QGEIRQQLKQDADNRLHQQALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLD
NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAIRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSRLDREFAVN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctgcgtctgaaaaatctgaattcgctaaagggtgagtggaaaatt
gatttcaccgcggagccgttcgccagcaacgggctgtttgccatcaccggcgcaaccggc
gcgggtaaaaccacgctgctggatgccatctgcctggcgctgtaccacgaaacgccgcgt
cttaataaggtctctcaagcgcaaaacgacctgatgacgcgcgataccgccgaatgcctg
gcggaagtggaatttgaggtcaaaggcgttgcttatcgcgctttctggagccagaaccgc
gcccgcaaccagccggacgggaacttacaggcaccgcgcgtagagctggcccgctgcgaa
gacggcaaaattctggccgacaaagtcacggataagctggaacaaaccgccgcactcacc
gggctggactatggtcgctttacccgctcgatgttgctctcgcaggggcagtttgccgcc
ttcctgaatgctaaaccgagcgatcgcgctgagctgctggaggaactgaccggcacggaa
atttacggccagatttccgccatggtttttgaaaaacacaaagcggcacgtaacgcgctg
gagatgtgcgaagcgcaggccgcaggggttgtgctgttgagcgaggaacagcagcagcac
ttgcagcaaagtttgcaggcacttactgacgaagagaaaatcctgctggcacagcagcag
agccaacagaaagattttcagtggcttacgcgtaacgacgaactgatacgtgagcagcag
cgcgcagccgcttcgcagcagcaggcgcaacaggctctgacggacgccgcgccgcaactg
gctaagctccagctggcgcagcccgccgcccagctacgtcctctatggcagcaccagcag
gagcagaccgcccgcctgtcgcaaaccgcagagcgaattgtcgaagtaaatactcgctta
ctcgacagagcggcacagcgcgcgcgtatccgcaacggtgcgcagcgcaaccgtgaacag
ttgcagacagagcacacggcgctgacgcagtggctaaccgaacacgatcgtttccgtcag
tggggacaggaaattgccggctggcgggcgcattttacgcagctgaatcgcgataaaaat
cagcttgttgcccaggcagcgcgcatggctgagcttcgtcagaagctggctgagctgccg
gagagtacgctgacgctgacggctgaggatctcgcgacggcaatggagcaacaggcacaa
tcgcgggcgctccgccagcgtctgactgcacttcacgctcgctatcagccgctgcaaaaa
cgactgcgccagaatgcggaaagcgtgcagaaagcgcaggctgagcagggtaagctcaat
gaaacgctgatcctgcggcgtcagcagttcaaagaaaaaaatcagcactatgccgacctg
aaagcgctctgtgagcgtgaggcgacaatcaaggatcttgagaattatcgtgctcagctg
gaagcgggtaagccttgcccgctctgcggttcacgcgaacacccggcagttgtgcagtat
caggcgcttgaactgactgacaatcagcgccgccgcgacgcgctggagaaagaggttgcc
gcgctaaaagaggaaggattgctggtgctcgggcaggtgaatgcgctgacccaacagatc
cagcgcgagactgaggaagcacaggctctctctcaggaagaacaagcactcactaaagag
tggctggaggtctgcacctccctgaacatagcgctgaatattcaggatgatatagcactc
tggatgagcgcacaggagcagtatgaacgccagctgtatcagctcagccagcgtctgacg
ctgcaaaaccagctcattgaacaggaaggtcaggcgcgccagtaccagcagcagctgacg
gcgacgcgtcaggcgctggcggcctcgctagagtcgctgtcgcttagcgtgcccgatgaa
ggggccgaaagcgcctggctgagcgcgcgcgaaagcgaatataccctgtggcaggaaaaa
caggcccagcacggtacgattcaggaacgtattaacgccctgatgccaatcctggagacg
ctgccggttaccgatgatacagaagccgacgcggttatacctgagaagtggcgcggcatc
cacgacgaatgcgtgtcgctgcaaagccagctcaccaccctccagcagcaggagacgctt
gagcgtgaacggctccagcaatcacaggctcagttcaacgccgcgctgaccgcgagctgc
tttgccgatcgggaggcatttctctccgccctgctggatgaagcgtcgatccgccagctt
gaacagcaaaagcagacgctggaaaaccagctccagcagaccacggcgctttcggtgcag
gcaagccagcagcttcaggcgcatcaggcacagcgccccgaggggctggaaaccgatgcc
gcaacgcttcaggcgcagttacatcagctggcgcaacagcttcgggacaacaccacgcat
cagggggagatccgccagcagctcaaacaggacgccgataaccgtctgcaccagcaggcg
cttatgcagcagattgaggaggcggcgcgtcaggccgacgactggggctatctcaatgcg
ctgataggctccagcaccggcgataaattccgtaaattcgcccaggggctaacgctggat
aatctggtgtggcttgccaaccagcagctcaaccgtctgcatggccgctatctgcttcag
cgtaaagccagcgacgcgctggagctggaagtggtcgatacctggcaggccgatgcgata
cgcgatacccgtaccctttccggcggggagagtttcctggtcagtctggcgctggcttta
gcgctttccgatctggtcagtcacaaaacgcgcattgattcgctgttcctggatgaaggg
ttcggcacgctcgacagtgaaacgctggacaccgcgctggatgcgctcgacgcactgaac
gccaccgggaaaaccatcggcgtgatcagccacgttgaggcgatgaaagagcgtattccg
gtgcagatcaaggtgaagaagatcaacgggctggggtatagcaggctggacagggagttt
gcggtgaattga
DBGET
integrated database retrieval system
