Enterobacter sp. JJBC: RY075_07225
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Entry
RY075_07225 CDS
T11441
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
entj Enterobacter sp. JJBC
Pathway
entj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
entj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RY075_07225 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
entj03019
]
RY075_07225 (rhlE)
Enzymes [BR:
entj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RY075_07225 (rhlE)
Messenger RNA biogenesis [BR:
entj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RY075_07225 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
DUF6482
Motif
Other DBs
NCBI-ProteinID:
WWQ27506
LinkDB
All DBs
Position
1507095..1508477
Genome browser
AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPTR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRSEGGAPKSSGK
PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtctgaacccggaaattctgcgcgccatcgcagagcagggc
tacgttgagccaacccctatccagcagcaggccattccggccgttttgcagggccgtgac
ctgatggcaagcgcgcagaccggtaccggtaagaccgcgggctttaccctgccgctgctg
gagctgttggtaaaaaaccagccgcacgccaaaggccgtcgtccggtgcgtgcgctgatc
ctcaccccaacccgcgagctggcggcccagattggcgagaacgtgcgtgaatacagccgc
tacctcaacattcgttcgctggtagttttcggcggggtaagcattaacccgcagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccggggcgtctgctggatctggaa
caccagaacgcggtgaagctcgataacatcgaaattctggtgctggacgaagccgaccgt
atgctggacatgggcttcatccacgacattcgccgcgtgctggcgaagctgccgacgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtcgcgcgccgcaacaccgcctccgagcaggtg
acgcagcacgttcactttgtggataagaagcgcaagcgggaactgctctcccagatgatc
ggacagggcaactggcagcaggtgctggtctttacccgcaccaagcacggcgccaaccac
ctggcggaacagctgaataaagacggcatccgcagcgcggcgatccacggcaacaagagc
cagggcgcgcgtacccgcgcgctggcggactttaaatctggcgacattcgcgtgctggtg
gcaaccgacatcgccgcacgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgttcaccgtatcggccgtaccggccgtgcggcg
gccaccggtgaagcgctctctctggtttgcgtggacgagcacaagctgctgcgtgacatc
gaacgcctgctgaagaaagagatcccgcgcattgaaaccccgggctatgaagtggacccg
tcgatcaaagccgagccaattcagaacggtcgtcagggtggcggacgcggtcagggcggc
ggtggtcgcggtcagcagccgcgtcgttcagaaggtggcgcgccgaaatcttcgggcaaa
ccgccgcgtcgtaataacgacagcaaaccagccggtgaaaacccgtggcgtagcggcgaa
gggaaaccggcaggcgaggggcagcgccgacgccgcccgcgtaaacctgctaacccgcag
taa
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