Enterobacter sp. JJBC: RY075_18400
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Entry
RY075_18400 CDS
T11441
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
entj Enterobacter sp. JJBC
Pathway
entj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
entj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RY075_18400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
entj03400
]
RY075_18400 (recD)
Enzymes [BR:
entj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RY075_18400 (recD)
DNA repair and recombination proteins [BR:
entj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY075_18400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
UvrD_C
T2SSE
MukB
CbiA
SRP54
ATPase
NTPase_1
NPHP3_N
TrwB_AAD_bind
AAA
Motif
Other DBs
NCBI-ProteinID:
WWQ25283
LinkDB
All DBs
Position
complement(3832387..3834207)
Genome browser
AA seq
606 aa
AA seq
DB search
MTMQDLLLDAVEQRVLRQLDVQFAMMIAADQPAVMLAAALLSKDAGEGHVCLPLSRLVVD
EKMPPVLQSCFALLGDKVDWQKILRESSAVGPGDNQAPLILTGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQTLDRLFDSGEDTDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQRCRIRLAAPTGKAAARLTESLGGAMQQLPLTQEQLALFPGEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVVFLGDRDQL
ASVEAGAVLGDICTYASYGYTAARAQELARLTGCSLEPDHTPIAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHATRTVFDGTFTDIEKKSLQSGEEYQAMLEEALQGYQHFLSC
VQQRSQPGQVIAAFGEYQLLCALREGPFGVTGLNDRLEQLLVQKRKINRQLHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGNGLRVWFQLPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELVYTAITRARQRLSLYADERVLSQAIATRTERRSGLS
AIFESV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggacttattgctggatgcggtagagcaacgcgtgctgcgtcagctggac
gtgcagtttgccatgatgattgccgctgaccagcccgccgtgatgcttgccgctgccctg
ttgagtaaagatgccggagaggggcatgtgtgtctgccgctctcgcgtctggtggttgac
gagaaaatgccgcctgtcctccagtcctgctttgcgctgctgggagataaggtggactgg
cagaaaatcttgcgggaatcgtcagccgttgggccgggagacaaccaggcaccgctgatc
ctgacgggggagcgcttatacctgaaccgcctgtggcgaaatgaactgacggtagcgcgt
ttctttagtgagaccaatgcgccgcttccctgcgacgaagcacagcttcgccagacgctg
gacaggctgtttgactccggtgaggacacagactggcagaaagtggcggcggccgtcgcc
ctgacgcggcggatctcggtgatatccggcggcccgggaacggggaaaacaacgaccgtc
gcaaagctgctggcagccctgatacagctttcaggagagcagcgatgccgtattcgtctg
gcggcgcccaccgggaaggctgcggcgcgtctgaccgaatcactgggcggcgcgatgcaa
cagctgccgctcactcaggagcagcttgcgcttttcccgggtgaagcaagtactctgcac
cgtctgctcggcgcgcagccgggtagccagcggctgcgctaccatgcgggtaatccgctg
catctggacgtgctggtggtggatgaagcctccatgatcgacctgaccatgatgtcgcgc
ctgattgatgctctgccaccccatgcgcgggtggttttcctgggcgatcgcgaccagctc
gcctctgtagaagccggggcggtgctgggagatatctgtacctacgccagttacggttat
accgccgcgcgggcgcaggagctcgcccgtctgaccggctgctcgcttgaacccgatcac
acgccgatcgcgggcgcactgcgtgacagcctgtgcctgctgcaaaaaagctaccgtttc
ggtagcgactccggcatcggccagctggctgcggcggtcaaccgtggcgacaggcacgcc
acgcgcacggtgtttgacggtaccttcactgacattgaaaagaaatcgctgcaaagcggg
gaagagtatcaggctatgcttgaggaggctctccagggataccagcattttctgagctgc
gtgcagcagcgcagtcagcccggacaggtcatcgccgcatttggcgaataccagcttctg
tgcgcattgcgggaagggccgtttggcgtcacgggcctgaacgacaggctggagcagttg
ctggtgcagaaacgcaaaattaaccgtcagctgcattcgcgatggtatgaaggccggcca
gtgatgatctcccgcaacgatagtgcgctggggctgttcaacggggatatcggcattgcg
ctcgatcgcggtaacggtctgcgcgtctggttccagctaccggacggtagcgtgaagtcc
gtccagcccagccgcctgccagagcatgaaacggcatgggcgatgacggtacataaatct
cagggctccgagttcaaccatgcggcgctgatcctgccgacacagctgtcgccggtagtg
acccgcgaactggtctacacagccattacccgtgcgcgccagcgcctgtcgctatatgcg
gatgagcgcgtgttgagccaggctattgccacccgtaccgagcgcagaagcggattaagc
gcgatatttgaatctgtctga
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