Enterobacter sp. JJBC: RY075_18405
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Entry
RY075_18405 CDS
T11441
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
entj Enterobacter sp. JJBC
Pathway
entj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
entj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RY075_18405 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
entj03400
]
RY075_18405 (recB)
Enzymes [BR:
entj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RY075_18405 (recB)
DNA repair and recombination proteins [BR:
entj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY075_18405 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
AIM5
Motif
Other DBs
NCBI-ProteinID:
WWQ25284
LinkDB
All DBs
Position
complement(3834204..3837746)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTHTAEPLDPLSLPLQGERLIEASAGTGKTYTIAALYLRLLLGLGGNAAFSRPLSVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRQTTDNPLYASLLDEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESELRYQACADFWRRHCYPLQRDIA
EAVHALWKGPEELLRAIDRYLQGEAPVIKSPPPADETLASRHEKIVAKITALKQKWNESV
GEIDAIIENSGIDRRKFNRGNQGKWIEKISAWAQEETRGYQLPDALEKFSQRFLTERTKA
DGIVPEHPLFVAIEALLAEPLTLNDLMITRAMTEIRQAVAREKRRRGELGFDDMLSRLDE
ALSSENGEALASAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVVAHYTLDTNWRSAPGMVESVNALFSRMETAFMFKEIPFLPVKS
APKNASLRFEVSGAEQPAMTFWLLEGEGYGVADYQAAMAQHCAAQIRDWLSAGNRGEALL
WKGEQANPVKASDITVLVRSRQEAALIRDALTLLDIPSVYLSNRDSVFDTLEAQEMLWLL
QAVLAPERENTLRSALASSMLGLNARDIDELNHDENAWDAVVEEFVHYRERWQKRGVMAM
LRELMTRRQIAENMLASSGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAYYHDRETFDAVLDL
SKAETSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPVFRRRGEKTGESDFHLSALGR
LIQRGEPKDAAGLRLCIESLCGDDIALHIPSLPDNSRWEMAQEPVTDLNARQITRVLADD
WRVTSYSGLQQQGQSIAQDLMPKLDVDAAGVGDVPVEPTLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAHWQPVLTDWINAILQAPLTAQGFSLRQLTAKNKQVE
MEFYLPVAGPLKADALDALIRQYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGENSEAYTQQAMAAAMQMHRYDLQYQLYTLALHRYLRHRIADYRYDDHFGGVIY
LFLRGVDAADPRSGIFSTRPDAELINKMDNLFAANTEEMA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacccataccgctgagccgcttgatcccctaagtttacctctacagggtgagcgactg
attgaagcctcagcgggaacgggaaaaacctataccatcgccgcgctctatctgcgtctg
ctgttggggctcggcggcaacgccgctttttcgcgcccgttaagcgtggaagagctgctg
gtggtaaccttcaccgaagcggccactgccgagctgcgtggccgtattcgcagcaacatt
catgagctgcgcatcgcctgtctgcgtcagacgacggataaccccctctacgcgagcctg
ctggacgagattgcggataagcaacaggctgcgcaatggctgctgctggccgaacggcaa
atggatgaagcgtccgtcttcaccattcacggtttttgtcagcgcatgctgagcctgaat
gcgtttgaatccggcatgctctttgagcagcagcttattgaagatgaatccgagcttcgc
tatcaggcctgtgcggatttctggcgtcgacactgttatccgttgcagcgcgacattgcc
gaagcggttcacgccctgtggaaaggtccggaagagcttcttcgcgccatcgaccgttac
ctgcaaggcgaggcgccggtcattaaatctcctccgcctgccgatgaaacgctggcctcg
cgccatgaaaagatcgtcgccaaaattaccgcgcttaagcagaagtggaatgagtcggtt
ggtgaaattgatgcaatcatcgaaaactcaggcatcgacagacgcaagttcaaccgtggg
aaccaggggaagtggatcgaaaagatcagcgcctgggcccaggaggagacgcggggttac
cagcttccggacgcactggaaaaattttcgcaacgctttttgaccgagcgaaccaaagcc
gacggtattgtgcctgagcatcccctgtttgtggcgattgaagcgctgcttgcggagcca
ttaacgctcaatgacctgatgatcacccgcgccatgacggagatccgccaggccgtcgcg
cgcgaaaaacgtcgccggggcgagctggggtttgatgacatgctgagccgcctggacgaa
gccctgtccagcgagaatggtgaagcgctcgccagcgcgatccgtacccgttttccggtg
gcgatgattgacgaatttcaggacaccgacccccagcagtaccgcatttttcgccgcatc
tggcgacagcagcccgacactgccctgttgttgattggcgaccctaaacaggcgatttac
gccttccgtggggcagatatcttcacctatatgaaagcccgtagtgaagttgtcgcgcat
tacacgttagacaccaactggcgttccgctccggggatggttgagagcgtcaatgcgctg
ttcagccgtatggagacggcgttcatgttcaaggaaatcccttttctgccggtgaaatcc
gccccaaaaaacgcatccctgcgcttcgaagtcagtggcgcggagcagcccgccatgacc
ttctggctgcttgaaggggaaggctatggcgttgctgattatcaggcggcgatggcccag
cactgcgccgcgcaaatccgtgactggctgagcgcaggcaaccgcggcgaggcgctgctg
tggaagggggaacaggcaaatcctgttaaagcctctgatattaccgtgctggtgcgcagt
cgtcaggaagcggcgttaatccgcgatgcgctaacattgctggatattccgtcagtgtat
ctctctaaccgtgacagcgtgttcgacacgctggaagcccaggaaatgctctggctgctt
caggcggtactggcgccggagcgcgaaaatacgcttcgaagcgcgctggccagctctatg
ctgggtttgaacgcgcgcgatattgatgagctcaaccatgacgaaaacgcatgggatgcg
gtggtggaagagtttgtccattaccgtgaacgctggcaaaaacgcggcgtcatggcgatg
ctgcgcgaattgatgacgcggcgtcagattgccgaaaatatgctggcgtcatccggcggt
gaaaggcgtcttaccgatattttacacatcagcgaactgttgcaggaagccggcacccag
cttgaaagtgaacatgccctcgtgcgctggctggcgcagcaaatcgcggatccaaacagt
aacgcctcaagccagcagatgcgtcttgagagcgataagcatctggtgcaaatcgtcact
attcacaaatcgaaaggtctcgagtatccgctggtctggctgccctttatcgcgaactac
cgcgttcaggatcaggcctattatcatgaccgcgagactttcgatgcggtgctcgatctc
agcaaggcggaaaccagcgttgagctggcggaagcggagcgtctggcggaggatttgcgc
ctgctttacgtggcgctgacccgttctgtctggcattgcagcctgggcgtcgcgccggtt
ttccgccgtcgcggggaaaaaacaggggagagcgatttccatttaagcgccttagggcgg
cttattcagcgtggtgagccaaaagatgcggcggggttgcgcctctgtattgagtcgctt
tgcggagacgatatcgccctgcatatcccttctctgccagacaacagccgctgggaaatg
gcgcaagagcccgtgaccgatcttaacgcgcgccagatcacacgggtgcttgccgacgac
tggcgcgtcaccagctattctggcctgcaacagcaagggcaaagtattgcgcaggatctc
atgccgaagctggacgtggatgccgcaggggtaggcgatgttccggttgaaccgacgtta
actccgcatcagttcccacgcggcgcgtcgccgggcacctttttgcacagcctttttgaa
gagcttgatttcacccagcctgtcagtgaggagtgggtgctgaagatgttgcagagcgga
ggctatgacgcgcactggcagcccgttctcactgactggatcaacgccattttgcaagcg
ccgctgacggcgcagggcttctctcttcgccagttaacggccaaaaataagcaggttgag
atggagttttatctgcccgtcgcaggcccgcttaaggccgacgcgctcgatgcgcttatc
cgtcagtacgatccgctgtcagccggttgcccgccgctgaacttccgtcaggtgcagggc
atgctgaaagggtttatcgacctggtcttccgtcacgaaggacggtactacctgctggat
tacaaatcaaactggctgggcgagaacagcgaagcctatacccagcaggcgatggcggcc
gccatgcaaatgcatcgctacgatctgcaatatcagctctataccctggcgctgcaccgc
tatttgcgccaccgtattgcggattaccgctacgacgatcattttggcggtgtcatctac
ctgttcctgcgcggggttgacgctgccgatccgcgctccgggatcttcagcactcgtccg
gatgcggaattgattaataaaatggataacctgtttgcagcaaacacggaggagatggca
tga
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