Enterobacter sp. LU1: FZF21_06520
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Entry
FZF21_06520 CDS
T11438
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
entl Enterobacter sp. LU1
Brite
KEGG Orthology (KO) [BR:
entl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
entl03021
]
FZF21_06520 (rapA)
Transcription machinery [BR:
entl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FZF21_06520 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QEL47080
LinkDB
All DBs
Position
complement(729316..732222)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHEGWQLKVEDVKEENGLLAYIGTRLDTDETNVILREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVALLL
AGNRLSNDELNTLSDLIGEQDIEPLLQAANSDSDNAGSARKELIDMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGTRKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTAHRSRKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDQVHSDLIGYLAAPENT
EGFDELIKSCREKHDALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLISFSM
NLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRLLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQAEKAAR
VLIDAARSEADEKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgtcgttgccgtcgatgcgcgcatggttaccctccttttccctgctaccggtgaaaac
cgcctgtacgctcgcaatgactcccctgttacccgcgtaatgttcaatccgggcgacacc
gtgaccagccacgaaggctggcagctgaaggttgaagacgtaaaagaagagaatggactg
ctcgcctacattggaacgcgtcttgataccgacgagacgaatgttatcctgcgtgaagtg
ctgctcgacagcaaactggttttcagcaagccgcaggaccgtctgtttgccgggcaaatc
gaccgaatggatcgcttctccctgcgctaccgcgcgcgtaagttccagagtgaacagtac
cgcatgccgtggagcggcctgcgcggccagcgtaccagccttattccccatcagctgaat
atcgcccatgacgtgggccgtcgccatgcgcctcgcgtgctgctggctgacgaagtgggc
ctgggtaaaaccatcgaagcaggcatgatcctgcaccagcagctgctctctggcgctgcc
gagcgcgtgctgattgtggtgccggaaacgctgcaacaccagtggctggtcgagatgctg
cgccgctttaacctgcgcttctccctgttcgacgacgagcgctatgccgaagcccagcac
gacgcggacaacccgtttgaaaccgaacagctggtgatctgctccctggacttcgtacgc
cgcagcaagcagcgcctggagcacctgtgcgacgcagaatgggatctgatggtcgtcgac
gaagcgcaccacctcgtctggagcgaagatgcgccaagccgtgaatacatggcgattgag
cagcttgccgagcgcgtaccgggcgttctgcttctgaccgccaccccggagcagctgggt
cttgagagccacttcgcccgtctgcgcctgctcgatccgaaccgattccacgattttgag
cagtttgttgaagagcagaaaaactaccgtccggtggcggacgccgtcgcgctgctgctg
gccggtaatcgtctctctaatgatgaacttaacaccctcagcgatctgatcggcgagcag
gatattgagccgctgcttcaggccgcgaacagcgacagcgataatgcgggatctgcgcgt
aaagagctgatcgacatgctgatggaccgtcacggcaccagccgcgtgctgttccgcaac
acccgtaacggcgtgaaaggcttcccgaaacgcgagctgcacaccatcaaactgccgctg
ccgacccagtaccagacggcgattaaagtctccggcattatgggcacccgtaaatcagcg
gaagatcgcgcgcgcgatatgctctacccggagcaaatttatcaggaatttgaaggcgac
actggcacctggtggaacttcgatccgcgcgtggagtggttaatgggttatctgaccgcg
caccgttcccggaaggtgctggtgatctgcgccaaggcagccaccgccctgcaacttgaa
caagtgctgcgcgagcgcgaaggtattcgcgccgccgtgttccatgaaggcatgtctatt
atcgagcgcgaccgcgctgcggcgtggtttagtgaagaggacagcggcgcgcaggttctg
ctgtgctccgaaatcggttctgaaggccgtaacttccagttcgccagcaatctggtgatg
ttcgatctgccgtttaacccggatctgctggagcagcgaatcggccgtctggatcgtatc
ggtcaggcgcacgatattcagatccacgttccgtatctggagaaaaccgcccagtccgtt
ctggttcgctggtaccacgaaggcctggatgcgtttgaacatacctgcccgacgggccgc
accatttatgaccaggtgcatagcgatctgatcggttacctcgcggcgccggaaaacacc
gagggctttgatgagctgatcaaatcctgtcgagagaagcacgacgcgctgaaagctcag
ctggagcagggtcgcgatcgcctgctggagatccactccaacggcggtgaaaaagcgcag
cagctggccgaaagtatcgaagaacaggacgatgacaccagcctgatcagcttctccatg
aacctgttcgacatcgtcggcattaaccaggacgatcgcggcgagaacatgatcgtgctg
accccgtccgatcatatgctggtgccggatttcccgggcctgccggaagacggctgcacc
atcacctttgagcgtgatgtggcgctttcccgcgaagatgcacagttcatcacctgggag
cacccgctgatccgcaacggtctggatctgatcctctccggcgataccggcagcagcacc
atctccctgttgaagaacaaagccttgcctgtgggcacgctgctggtggagctgatctac
gttgtggaagcgcaggcgccgaaacagcttcagcttaaccgcttcctgccgccaactccg
gtgcgtctgctgctggataaaaacggtacgaacctggccggccaggtggagtttgaaagc
ttcaaccgtcagctgagcgcggtgaaccgccataccggcagtaagctggtgaatgcggtg
cagcaggacgtgcatgccattctgcaactgggtgaagcccaggccgaaaaagcggccaga
gtgctgatcgatgcggcgcgtagcgaagccgatgagaagctttctgccgagctgtcgcgt
ctggaagcgttgaaagcagtgaaccctaacattcgtgacgatgagctggccgccattgag
agcaaccgccagcaggtgctggaaagcctgaatcaggcgggatggcgtctcgacgccctg
cgtcttatcgttgtgacgcatcagtaa
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