Enterobacter sp. LU1: FZF21_14720
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Entry
FZF21_14720 CDS
T11438
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
entl Enterobacter sp. LU1
Pathway
entl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
entl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FZF21_14720 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
entl03400
]
FZF21_14720 (recD)
Enzymes [BR:
entl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FZF21_14720 (recD)
DNA repair and recombination proteins [BR:
entl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FZF21_14720 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
UvrD_C
AAA_28
MukB
CbiA
T2SSE
NPHP3_N
SRP54
ATPase
NTPase_1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QEL48584
LinkDB
All DBs
Position
complement(3658918..3660738)
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AA seq
606 aa
AA seq
DB search
MTMQDLLLDAVEQRVLRQLDVQFAMMIAADQPAVMLAAALLSKDAGEGHVCLPLSRLVVD
EKMPPVLQSCFALLGERVDWQKILRESSAVGPGDNQAPLILTGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQTLDRLFDSGEATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQRCRIRLAAPTGKAAARLTESLGGAMQRLPLTQEQLALFPGEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVVFLGDRDQL
ASVEAGAVLGDICTYASYGYTAARAQELARLTGCSLEPDHTPIAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHATRRVFDGSFTDIEKKSLQSGEEYQAMLEEALQGYQHFLSC
VQQRSQPGQVIAAFGEYQLLCALREGPFGVTGLNDSLEQLLVQKRKINRQLHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGNGLRVWFQLPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELVYTAITRARQRLSLYADERVLSQAIATRTERRSGLS
AIFESV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggacttattgctggatgcggtagagcaacgcgtgctgcgtcagctggac
gtgcagtttgccatgatgattgccgctgaccagcccgccgtgatgcttgccgctgccctg
ttgagtaaagacgccggagaggggcatgtgtgtctgccgctctcgcgtctggtggttgac
gagaaaatgccgcctgtcctccagtcctgctttgcgctgctgggggaaagggtggactgg
cagaaaatcttgcgtgaatcgtcagccgtcgggccgggagacaaccaggcaccgctgatc
ctgacgggggagcgcttatacctgaaccgcctgtggcgaaacgaactgacggtagcgcgt
ttctttagtgagaccaatgcgccgcttccctgcgacgaagcacagcttcgccagacgctg
gacaggctgtttgactccggtgaggccacagactggcagaaagtggcggcagccgtcgcc
ctgacgcggcggatctcggtgatatccggcggcccgggaacggggaaaacaacgaccgtc
gcaaagctgctggcagccctgatacagctttcaggcgagcagcgatgccgtattcgtctg
gcggcgcccaccgggaaggccgcggcgcgtctgaccgaatcactgggcggtgcgatgcaa
cggctgccgctcacccaggagcagcttgcgcttttcccgggtgaagcaagtactctgcac
cgtctgctcggcgcgcagccgggtagccagcggctgcgctaccatgcgggcaatccgctg
catctggacgtgctggtggtggatgaagcctccatgatcgacctgaccatgatgtcgcgc
ctgatcgatgcgctaccaccccatgcgcgcgtggttttcctgggcgatcgcgaccagctc
gcctctgtagaagccggggcggtgctgggagatatctgtacctacgccagttacggttat
accgccgcgcgggcgcaggagctcgcccgtctgaccggttgctcgcttgaacccgatcac
acgccgatcgcgggcgcactgcgtgacagcctgtgcctgctgcaaaaaagctaccgtttc
ggtagcgactccggcatcggccagctggctgcggcggtcaaccgtggcgacaggcacgcc
acgcgtagggtgtttgacggttctttcactgacattgaaaagaaatcgctgcaaagcggg
gaagagtatcaggctatgcttgaggaggctctccagggataccagcattttctgagctgc
gtgcagcagcgcagtcagcccgggcaggtcatcgccgcatttggcgaataccagcttctg
tgcgcattacgggaagggccgtttggcgtcacgggcctgaacgacagtctggagcagctg
ctggtgcagaagcgcaaaattaaccgtcagctgcattcgcgatggtatgagggccggcca
gtgatgatctcccgcaacgacagtgcgctggggctgttcaacggcgatatcggcattgcg
ctcgatcgcggtaacggactgcgcgtctggttccagctaccggacggcagcgtgaagtcc
gtccagcccagccgcctgccagagcatgaaacggcatgggcgatgacggtacataaatct
cagggctccgagttcaaccatgcggcgctgatcctgccgacacagctgtcgccggttgtg
acccgcgagctggtctacaccgccattacccgtgcgcgccagcgtctttcactgtatgcg
gatgagcgcgtgttgagtcaggcgattgccactcgtaccgagcgcagaagcggattaagc
gcgatatttgaatctgtctga
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