Entomomonas sp. E2T0: MTZ49_06135
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Entry
MTZ49_06135 CDS
T09961
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ento
Entomomonas sp. E2T0
Pathway
ento03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ento00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTZ49_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ento03019
]
MTZ49_06135
03009 Ribosome biogenesis [BR:
ento03009
]
MTZ49_06135
Enzymes [BR:
ento01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTZ49_06135
Messenger RNA biogenesis [BR:
ento03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTZ49_06135
Ribosome biogenesis [BR:
ento03009
]
Prokaryotic type
rRNA helicases
MTZ49_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
UTP25_NTPase-like
AAA_22
AAA_19
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UYZ85130
LinkDB
All DBs
Position
complement(1272197..1273990)
Genome browser
AA seq
597 aa
AA seq
DB search
MTQKKNSSFAELGIHPSVLAAIAAVGYEEPSPIQAKAIPEILAGQDIIGQAQTGTGKTAA
FALPILSKIDPTNRHTQVLVLAPTRELALQVADAFESYAKQMPTVKVAAIYGGAPMGAQL
KAIRNGVQVLVATPGRLCDHLRRDANFLSGVQFLVLDEADEMLKLGFMDDLESIFKTLPK
KRQTALFSATLPASIKAIAEKQLNDPKHIKIANKTQTVESIEQTYLMVHPDQKNAAVLRL
LEVEDFDALIAFVRTKQATLDLAMELEIKGYRVAALNGDIAQNQREKVIESLKDGRLDIV
VATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRTGKALLLVTPRERRMLQT
IERVTKQEVSEATLPNAQSILVARIKRLTKNLQPFAKPEDNQQHYIDLVNQLTTDLTCSV
EELAVALLRRATNRRPLTVEEIERTEPKLTPISNVKREPRERKERGDRKERGDRKERGER
GDRKERGERKERGERSERGPRIEREGRSSSRSNDRVSEGKVRCRTPVGSLDGVAAKNLLG
AILNEASINKDQIGKITIRDSFSIVELPEKGLDKILTKLKDTRVAGKPLKLRRYRED
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaaaaaaaacagctcatttgctgagcttggcattcatcctagtgttttagct
gccattgcagctgttggttacgaagaaccatctcctattcaagcaaaagccattccagaa
attttagctggccaagatattattggccaagcacaaacaggaacaggtaaaacagccgct
tttgcattacctattttaagtaaaattgatcctactaatcgccatacccaagtattggta
ttagcacctactcgcgaattagcattacaagtagcagatgcatttgaaagctatgccaaa
caaatgcctactgttaaagtagcagctatttatggtggggcacctatgggggcacaactt
aaagcaatccgtaatggtgtacaagtgttagtagctacccctggtagattatgtgatcac
ttacgccgtgatgctaatttcttatcaggcgtgcaatttcttgttttagatgaagcagat
gagatgttaaagcttggttttatggatgatttagaaagcatctttaaaacactgcctaaa
aaacgtcaaaccgctttattttcagctactttacctgcatctatcaaggctattgctgaa
aaacaattaaacgatccaaaacatattaaaatagccaacaagacacaaactgttgaaagt
attgaacaaacctatttaatggtgcatccagatcaaaagaacgcagctgtattacgttta
ttagaagtagaagactttgatgcattaattgcgtttgttcgcaccaaacaagctacctta
gatttagcaatggaattagagatcaaaggttaccgtgttgcagcattaaatggtgatatt
gcacaaaatcaacgtgaaaaagtaattgaatcattaaaagatggtcgtttagatattgtg
gtagctactgacgtagcagctcgtggtttagatgtaccacgtattactcacgtatttaac
gtagatatgccttatgatcctgaatcatatgtacatcgtattggccgtactggtcgtgcc
ggtcgtacaggtaaagctttattattagtgacaccacgtgaacgccgtatgttacagacc
attgagcgtgtaactaaacaagaagtaagcgaagccactttacctaatgcacaaagcatt
ttagtagctagaattaaacgtttaactaaaaatctacaaccttttgccaaaccagaagat
aaccaacaacactacattgatctagttaatcaattaaccactgatcttacttgctcagta
gaagaattagcagttgccttattacgtcgtgctactaatcgtcgtccattaaccgtggaa
gaaattgaaagaaccgaacctaaactaactccaatcagtaatgtgaagcgtgagcctaga
gagcgcaaagaacgtggtgatagaaaggaaagaggtgatcgtaaggaacgtggcgaacgc
ggcgacagaaaagaaaggggcgaacgtaaagagcgcggtgagcgtagcgaacgcggacca
agaatagagcgtgaaggccgttctagcagccgctctaacgatagagtatcagaaggaaaa
gtacgttgtcgtacacctgttggtagtttagatggtgttgctgccaagaacttattaggt
gctattcttaatgaagccagcattaataaagatcaaattggtaaaattactatccgtgac
agcttcagtatagtagaacttcctgaaaaaggattagataaaatcctaactaagctcaaa
gatactcgagtggcaggtaaaccattaaaacttcgtcgctatcgcgaagattaa
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