Entomomonas sp. E2T0: MTZ49_06725
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Entry
MTZ49_06725 CDS
T09961
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ento
Entomomonas sp. E2T0
Pathway
ento03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ento00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MTZ49_06725 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ento03400
]
MTZ49_06725 (sbcB)
Enzymes [BR:
ento01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
MTZ49_06725 (sbcB)
DNA repair and recombination proteins [BR:
ento03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MTZ49_06725 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MTZ49_06725 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTZ49_06725 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UYZ85235
LinkDB
All DBs
Position
1396763..1398199
Genome browser
AA seq
478 aa
AA seq
DB search
MTTSIFWYDFETTGISPRADRPLQVAGIRTDLELNEIAEPINLYCQLSEDVLPHPQACLV
TGITPETMLKKGVNEATFFQRLHHELSLPQTCTAGYNSIRFDDEVTRYGLYRNFYDPYAR
EWQGGNSRWDIIDLLRATYALRPEGMVWPQQDGRVSLRLELLTAQNGIQHEQAHDALSDV
RATIALAKLVKEKQPQLYNYLFNLRFKKEVQARISLLKPMVHVSGRFSADRHYLSVVLPL
AWHPVNKNAVIVCDLQKDITPLLTLTADEIVQYLYTKYEELPDDISPIPLKLIHINRCPV
VAPMGVLREQDIERLPLDVAYCLKQAAQLKDSQLLWQSKLMDIYRQEGKQFAEAIDDPEQ
QLYAGFLSERDKRLCDHIRQLNPARLIDEMAHFEDGRLPELLFRYRARNYPDTLTKEERI
QWQHFCKDRLIDINKGAPITLEQFKLVCQELFDNCDIQQQQILRLWQNYADNLEQKYL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaactagcattttttggtatgattttgaaacaacgggaattagtccgcgagcagat
agacctttgcaggtagcgggtattagaactgatttagagcttaacgaaatagcagagcct
ataaatctatattgccagttaagtgaggatgttttacctcatcctcaagcctgtttagtg
acagggattacacctgaaaccatgttaaagaagggtgtcaatgaagctactttttttcaa
cgtttacatcatgagttgtctttgccacaaacttgcacagcaggttataacagtattcgt
tttgatgatgaggtgactcgttatggcctttatcgtaatttttatgatccttatgctcgg
gagtggcagggggggaatagtcgttgggatattatagatttattaagagcaacctatgca
cttcgtccagaaggtatggtctggcctcaacaggatggtagagtatcgttacgtttagaa
ctattaacagcacaaaatggcattcagcatgaacaggcgcatgatgcattatcagatgta
agggctaccatcgcattagctaaattagtgaaagaaaaacagccacagctttataattat
ttgtttaatctgcgttttaaaaaagaagtccaagcaagaattagtttattaaagccaatg
gtacatgtctcagggcggttctccgctgatcgacactatctatctgttgttctaccttta
gcatggcatcctgttaataaaaatgcagtgattgtgtgcgatttacaaaaagatataacc
cctttgttaacattaacagctgacgaaattgttcaatatttatacactaaatatgaagag
ttacctgatgatatttcgcccataccattaaaacttatccatattaatcgttgtcctgtt
gtagcacctatgggcgtgttaagagagcaagatattgaacgcttaccattagatgttgct
tattgtttgaaacaagcagcacaactgaaagattcacagttactatggcaaagtaaatta
atggatatctatcgacaagagggtaaacaatttgctgaggctattgatgaccctgaacag
cagttatatgctggttttttatcagaacgtgataaaaggctttgtgatcatatacggcaa
ttaaatccagcaaggcttatcgatgaaatggcgcattttgaagatggtcgtttaccagag
ttattatttcgctatcgggctagaaactatcccgatacactgactaaggaggagcgaata
caatggcagcatttttgtaaagatcgattaatagatattaataaaggcgcacctattaca
cttgagcagtttaagttggtttgccaagaattatttgataattgtgatatacagcaacaa
caaatcttaagattatggcaaaattacgcagataatttagagcaaaaatatttataa
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