Enterobacter sp. YSU: H2Z33_02885
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Entry
H2Z33_02885 CDS
T11024
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
enty Enterobacter sp. YSU
Brite
KEGG Orthology (KO) [BR:
enty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enty03400
]
H2Z33_02885 (sbcC)
DNA repair and recombination proteins [BR:
enty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2Z33_02885 (sbcC)
Archaeal homologous recombinant proteins
H2Z33_02885 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
nSTAND_NTPase5
ABC_tran
cobW
tRNA_m1G_MT
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPX98297
LinkDB
All DBs
Position
606307..609438
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQAQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNQPDGNLQAPRVELARCE
DGKILADKVTDKLEQTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVFEKHKAARNALEMCEAQAAGVVLLSEEQQQHLQQSLQALTDEEKVLLAQQQ
SQQKDFQWLTRNDELIREQQRAAASQQHAQQALTDAAPQLAKLKLAQPAAQLRQLWEYQQ
EQTTRLAQTTERIVEVNTRLLDRAAQRSRIRNGALRNREQLQAEHTVLTQWLTEHDRFRQ
WGQEIAGWRAHFTQLGRDKNQLVAQSARMAELRQKLAEMPESRLTLTAEDLATAMEQQAQ
SRALRQRLTALHARFQPLQKRLRQNAESVQKAQAEQAKLNETLILRRQQFKEKNQHYADL
KALCEREATIKDLENYRAQLEAGKPCPLCGSREHPAVVQYQALELTDNQRRRDALEKEVA
ALKEEGLLVLGQVNALTQQIQRETEEAQALSEEEQALTKEWLEVCASLNIALNIQADIAP
WMSEQEQYERQLYQLSQRLTLQNQLNEQEGQARQYQQQLTATRQALAASLQSLSLSVPDE
GAESAWLSTRESEYTLWQEKQAQHGTIQEGINALMPILETLPVTNDAEADAVIPENWRGI
HDECVSLQSQLTTLQQQETLERERLQQSQAQFNAALTASCFADREAFLSALLDETSIRQL
EQQKQTLENQLQQATALSVQASMQLQAHQAQRPEGLETDAATLQAQLHQLAQQLRDNTTH
QGEIRQQLKQDADNRLHQQALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLD
NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSRLDREFAVQ
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctgcgtctgaaaaatctaaattcgctaaagggtgagtggaaaatt
gatttcaccgcggagccgttcgccagcaacgggctgtttgccatcaccggcgcaaccggc
gcgggtaaaaccacgctgctggatgccatctgcctggcgctttaccacgaaacgccgcgt
cttaataaggtctctcaggcgcaaaacgacctgatgacgcgcgataccgccgaatgcctg
gcggaagtagaatttgaggtcaaaggcgttgcttatcgcgctttctggagccagaaccgc
gcccgcaaccagccggacgggaacttacaggcaccgcgcgttgagctggcccgctgcgaa
gacggcaaaattctggccgacaaagtcacggataagctggaacaaaccgccacgcttacc
gggctggactatggtcgctttacccgttcgatgttgctctctcaggggcagtttgccgcc
ttcctgaatgctaaaccgagcgatcgcgcagagctgctggaggaactgaccggcacggaa
atttacggccagatttccgccatggtttttgaaaaacacaaagcggcacgtaacgcgctg
gagatgtgcgaagcgcaggccgcaggggttgtgctgctgagcgaggaacagcagcagcac
ttgcagcaaagtttgcaggcacttactgacgaagaaaaagtcctgctggcacagcagcaa
agccaacagaaagattttcagtggcttacgcgtaacgacgaactgatacgtgagcagcag
cgtgcagctgcttcgcagcagcacgcgcaacaggctctgacggacgccgcgccccaactg
gcgaagctcaagctggcgcagcccgccgcccagctacgtcagctatgggagtatcagcag
gagcagaccacccgcctggcgcagacaacagagcgaattgttgaagtaaatactcgctta
ctcgacagagcggcgcagcgctcgcgtattcgcaacggtgcgctgcgcaaccgtgaacag
ttgcaggcagagcatacggtactgacgcagtggctgaccgaacacgatcgtttccgtcag
tgggggcaggaaattgccggctggcgggcgcattttacgcaactgggtcgcgataaaaat
cagcttgttgcccagtcagcgcgcatggctgagcttcgtcagaagctggctgagatgcct
gaaagtaggttgacgctgacggctgaggatctcgcgacggcaatggagcaacaggcacaa
tcgcgggcgctccgccagcgtctgacagcgcttcacgctcgctttcagccgctgcaaaaa
cggctgcgccagaatgcggaaagcgtgcagaaagcgcaggctgagcaggctaagctcaat
gaaacgctgatcctgcggcgtcagcagttcaaagagaaaaatcagcactatgctgacctg
aaagcgctctgtgagcgtgaggcgacaatcaaggatcttgagaactatcgtgcacagctc
gaagcgggtaagccttgcccgctctgcggttcacgcgaacatccggcagttgtgcagtat
caggcgcttgaactgactgacaatcagcgccgccgcgacgcgctggagaaagaggttgct
gcgctaaaagaggaaggattgctggtgctcgggcaggtgaatgcgctgacccagcagatc
cagcgcgagactgaggaagcacaggctctctctgaggaagagcaagcactcactaaagag
tggctggaggtctgcgcctccctgaacatagcgctgaatattcaggctgatattgccccc
tggatgagcgaacaggaacagtatgaacgccagctgtatcagctcagccagcgtctgacg
ctgcaaaaccagctcaatgaacaggaaggtcaggcgcgccagtaccagcagcagctgacg
gcgacgcgtcaggcgctggcggcctcgttacaatcgctgtcgcttagcgtgcccgatgaa
ggggctgaaagcgcctggctgagcacgcgcgaaagcgaatataccctgtggcaggaaaaa
caggcccagcacggtacgattcaggaaggtattaacgccctgatgcccattctggagacg
ctgccggttaccaatgatgcagaagccgacgcggttatccctgagaactggcgcggcatc
cacgacgaatgcgtgtcgctgcaaagtcagctcaccaccctacagcaacaggagacgctt
gagcgtgaacggctccagcaatcacaggctcagttcaacgccgcgctgaccgcgagctgc
tttgccgatcgggaagcatttctctccgccctgctggatgaaacgtcgatccgccagctt
gaacaacaaaagcagacgctggaaaaccagctccagcaggccacggcgctttcggtgcag
gcaagcatgcagcttcaggcgcatcaggcacagcgccccgaggggctggaaaccgatgcc
gcaacgcttcaggcgcagttacaccagctggcgcaacagcttcgggacaacaccacgcat
cagggggagatccgccagcagctcaaacaggacgccgataaccgtctgcaccagcaggcg
cttatgcagcagattgaggaggcggcgcgtcaggccgacgactggggctatctcaacgcg
ctgataggctccagcaccggcgataaattccgtaaattcgcccaggggctgacgctggat
aatctggtgtggcttgccaaccagcagctcaaccgtctgcatggccgctatctgcttcag
cgtaaagccagcgacgcgctggagctggaagtggtcgatacctggcaggccgatgcggta
cgcgatacccgtaccctttccggcggggagagtttcctggtcagtctggcgctggcttta
gcgctttccgatctggtcagtcacaaaacgcgcattgactcgctgtttctggatgaagga
ttcggcacgctcgacagcgaaacgctggacaccgcgctggacgcgctcgacgcgctgaac
gccaccgggaaaactatcggcgtgatcagtcacgtagaggcaatgaaagagcgcattccg
gtgcagatcaaagtgaagaagatcaacgggctgggatatagcaggctggacagggagttt
gcggtgcagtaa
DBGET
integrated database retrieval system
