Enterobacter sp. YSU: H2Z33_13295
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Entry
H2Z33_13295 CDS
T11024
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
enty Enterobacter sp. YSU
Pathway
enty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H2Z33_13295 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enty03400
]
H2Z33_13295 (recB)
Enzymes [BR:
enty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H2Z33_13295 (recB)
DNA repair and recombination proteins [BR:
enty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2Z33_13295 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
AIM5
bDLD3
Motif
Other DBs
NCBI-ProteinID:
QPX95916
LinkDB
All DBs
Position
2730076..2733618
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AA seq
1180 aa
AA seq
DB search
MTHTAEPLDSLSLPLQGERLIEASAGTGKTYTIAALYLRLLLGLGGNAAFSRPLSVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRQTTDNPLYASLLDEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESELRYQACADFWRRHCYPLQRDIA
EAVHALWKGPEELLRAIDRYLQGEAPVIKSPPPADETLASRHEKIVAKIAALKHKWNESV
GEIDAIIENSGIDRRKFNRGNQGKWIEKISVWAQEETRGYQLPDALEKFSQRFLTERTKA
DGIVPEHSLFVAIDALLAEPLTLNDLMITRAMTEIRQAVAREKRRRGELGFDDMLSRLDE
ALSSENSEALASAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVVAHYTLETNWRSAPGMVESVNALFSRMETAFMFNEIPFLPVKS
APKNASLRFEVSSAVQPAMTFWLLEGEGYGVADYQAAMAQHCAAQIRDWLSAGARGEALL
WKGEQANPVKASDITVLVRSRQEAALIRDALTLLDIPSVYLSNRDSVFDTLEAQEMLWLL
QAVLAPERENTLRSALACSMLGLNARDIDELNHDENAWDAVVEEFVHYRERWQKRGVMAM
LRELMTRRQIAENMLASSGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAYYHDRETFDAVLDL
SKAETSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPVFRRRGEKTGESDFHLSALGR
LVQRGEPKDAAGLRLCIESLCGDDIALHIPSLPDNSRWEMAQEPATDLNARQITRVLADD
WRVTSYSGLQQHGQSIAQDLMPKLDVDAAGVGDVPVEPTLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSQEWVLKMLQSGGYDAHWQPVLTDWINAILQAPLTTQGFSLRQLTAKNKQVE
MEFYLPVAGPLKADALDALIRQYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGENSEAYTQQAMAAAMQMHRYDLQYQLYTLALHRYLRHRIADYRYDDHFGGVIY
LFLRGVDAADPRSGIFSTRPDAELINKMDNLFAANTEEMA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacccataccgctgagccgcttgattccctaagtttacctctacagggtgagcgactg
attgaagcctcagcgggaacgggaaaaacctataccatcgccgcgctctatctgcgtctg
ctgttggggctcggcggcaacgccgctttttcgcgcccgttaagcgtggaagagctgctg
gtggtaaccttcaccgaagcggccactgccgagctgcgtggccgtattcgcagcaacatt
catgagctgcgcatcgcctgtttgcgtcagacgacggataaccccctctacgcgagcctg
ctggacgagattgcggacaagcaacaggctgcgcaatggctgctgctggccgagcggcaa
atggatgaagcgtccgtcttcaccattcacggtttttgtcagcgcatgttaagcctgaat
gcgtttgaatccggcatgctctttgagcagcagcttattgaagatgaatccgagcttcgc
tatcaggcctgtgcggatttctggcgtcgtcactgttatccattgcagcgcgacattgcc
gaagcggttcacgccctgtggaaaggtccggaagagcttcttcgcgccatcgaccgttac
ctgcaaggcgaagcgccggtcattaaatctccgccgcctgccgatgaaacgctggcctcg
cgccatgaaaagatcgtcgccaaaattgcggcgcttaagcataagtggaatgagtcggtt
ggtgaaattgatgcaatcatcgaaaactcaggcatcgacagacgcaagttcaaccgtggg
aaccaggggaagtggatcgaaaagatcagcgtctgggcccaggaggagacgcggggctac
cagcttccggacgcgctggaaaaattttcgcagcgctttttgaccgagcgaaccaaagcc
gacggcattgtgcctgagcattccctgtttgtggcgattgatgcgctgcttgcggagcca
ttaacgctcaatgacctgatgatcacccgcgctatgacggagatccgccaggccgtcgcg
cgcgaaaaacgtcgccggggcgagctggggtttgatgacatgctgagccgcctggacgag
gcgctgtccagcgagaatagtgaagcgctcgccagcgcgatccgtacccgttttcctgtg
gcgatgattgacgaatttcaggacaccgaccctcagcagtaccgcatttttcgccgcatc
tggcgacagcagcccgacactgccctgttgttgataggcgaccctaaacaggcgatttac
gccttccgtggggcagatatcttcacctatatgaaagcccgtagtgaggttgtcgcgcat
tacacgttagaaactaactggcgttccgcgccggggatggttgagagcgtcaatgcgctg
ttcagccgtatggagacggcgttcatgttcaatgaaatccctttcctgccggtgaaatcc
gccccaaaaaacgcatccctgcgcttcgaagtcagtagcgcggtacaacccgccatgacc
ttctggctgctggaaggggaaggctatggggttgccgactatcaggcggcgatggcccag
cactgcgccgcgcaaatccgtgactggctgagcgcaggcgcgcgcggcgaggcgctgctg
tggaagggggaacaggcgaatcctgttaaagcctctgatattaccgtgctggtgcgcagt
cgtcaggaagcggcgctaatccgcgatgcgctaacgctgctggatattccgtcagtgtat
ctctctaaccgcgacagcgtgttcgacacgctggaagcccaggaaatgctctggctgctt
caggcggtgctggccccggagcgcgaaaatacgcttcgaagcgcgctggcctgctctatg
ctggggttgaacgcgcgcgatatagatgagctcaaccatgacgaaaacgcatgggatgcg
gtggtggaagagtttgtccattaccgtgaacgctggcaaaaacgcggcgtcatggcgatg
ctgcgcgaattgatgacgcggcgccagattgccgaaaatatgctggcgtcatcgggcggt
gaaaggcgtcttaccgatattttacacatcagcgaactgttgcaggaagccggcacccag
cttgaaagtgaacatgccctcgtgcgctggctggcgcagcaaatcgcggatccaaacagt
aacgccgcaagccagcagatgcgtcttgagagcgataagcatctggtgcaaatcgtcacc
attcacaaatcgaaaggtctcgagtatccgctggtctggctgccctttatcgccaactac
cgcgttcaggatcaggcctattatcatgaccgcgagactttcgatgcggtgctcgatctc
agcaaggcggaaaccagcgttgagctggcggaagcggagcgtctggcggaggatttgcgc
ctgctttacgtggcgctgacccgttctgtctggcattgcagcctgggcgtcgcgccggtt
ttccgccgtcgcggggagaaaacaggggagagcgatttccatttaagcgccttagggcgg
cttgttcagcgtggtgagccgaaagatgcggcggggttgcgcctctgtattgagtcgctt
tgcggagacgatatcgccctgcatatcccttctctgccagacaacagccgctgggaaatg
gcgcaagagcccgcgaccgatcttaacgcgcgccagatcacacgggtgcttgccgacgac
tggcgcgtcaccagctattctggcctgcaacagcacgggcaaagtattgcgcaggatctc
atgccgaagctggacgtggatgccgcaggggtgggcgatgttccggttgaaccgacgtta
actccacatcagtttccacgcggcgcgtcgccgggcacctttttgcacagcctctttgaa
gagcttgatttcacccagcctgtcagtcaggagtgggtgctgaagatgttgcagagcgga
ggctatgacgcgcactggcagcccgttctcactgactggatcaacgccattttgcaggcg
ccgctgacgacgcagggcttctctcttcgccagttaacggccaaaaataagcaggttgag
atggagttttatctgcccgtcgcaggcccgcttaaggccgacgcgctcgatgcgctcatc
cgtcagtacgatccgctgtcagccggttgcccgccgctgaacttccgtcaggtgcagggc
atgctgaaagggtttatcgacctggtcttccgtcacgaaggacggtactacctgctggat
tacaaatcgaactggctgggcgagaacagcgaagcctatacccagcaggcgatggcggca
gccatgcaaatgcatcgctacgatctgcaatatcagctctataccctggcgctgcaccgc
tatttgcgccaccgtattgcggattatcgctacgacgatcattttggcggtgtcatctat
ctgttcctgcgcggggttgatgctgccgatccgcgctccgggatcttcagcactcgtccg
gatgcggaattgattaataaaatggataacctgtttgcagcaaacacggaggagatggca
tga
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