Enterobacter sp. YSU: H2Z33_16920
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Entry
H2Z33_16920 CDS
T11024
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
enty Enterobacter sp. YSU
Pathway
enty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H2Z33_16920 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enty03400
]
H2Z33_16920 (sbcB)
Enzymes [BR:
enty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H2Z33_16920 (sbcB)
DNA repair and recombination proteins [BR:
enty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H2Z33_16920 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2Z33_16920 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2Z33_16920 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QPY00098
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All DBs
Position
complement(3517929..3519356)
Genome browser
AA seq
475 aa
AA seq
DB search
MVSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGEPEVFYCKPADDYLPQ
PGAVMVTGITPQEARDKGVSEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNIFYRNF
YDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENDDGLPSFRLEHLTRANGIEHSNA
HDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISGMFGAWR
GNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKEALGDLPAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDNPQVREKVVAIFAEAEPFVPS
ENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNYRARNYPGTLD
EAEQERWLQHRRNVFTPEFLNSYAQELEMLYGQYEGNAEKQALLKALFQYAQEIV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ctggtgtctgactctgccgcgcgcccgacttttttgttccacgattacgaaacctttggc
acccatccggcgctggaccgaccggcgcagtttgcggctatccgtaccgatgacgaattt
aacgtcatcggcgaacccgaggtgttttactgtaagcccgccgatgactatctgccgcag
ccgggcgcggtaatggtgacgggcatcacgcctcaggaagcgcgggataaaggcgttagc
gaagcagaatttgcccgtcgcatccacgacctgttcacggtgcccaatacctgcgtggtg
ggttacaacaacatccgttttgacgatgaagtgacgcgcaatatcttctaccgcaacttc
tacgatccgtatgcctggagctggcagaaccgtaattcacgctgggatttgctggatatc
atgcgcgcctgctatgcgctgcgcccggaggggattaactggccggagaacgacgacggc
ttgccgagcttcaggctcgagcacctgacgcgggccaacggcattgagcacagcaacgcc
cacgacgcgatggcagacgtttacgcgaccatcgctatggcgaaacttgtaaaaaccgcg
cagccgcgcctgtttgagtatttgttgagccatcgcagcaagcaaaagctgatgacgcta
attgacgtgccgcagatgaaaccgctggtgcatatttcagggatgttcggtgcgtggcgc
gggaatacaagctgggtggcgccgcttgcctggcatccggacaaccgtaacgccgtcatc
atggtggatctcgccggagatatctccccgctgcttgagctcgacagcgacaccttacgt
gaacggctctatacgccgaaagaggcgctgggtgacctgccagccgtaccggtaaaactg
gtgcacatcaataagtgcccggtgctggcgcaggccaacacgctgcgcccggaagacgcc
gatcggctggggattaaccgtcagcactgcctcgataacctgaaagtgctgcgcgacaac
ccgcaggtgcgcgagaaagttgtcgccatttttgctgaagcagagccgttcgtgccgtct
gagaatgtggatgcgcagctttataacggcttcttcagcgacgccgatcgcgcggcgatg
aatatcgtgctgcaaaccgacccgcgtaacctgcccgcgctggatatcaccttcgcagat
aagcgcattgagaagttgatgtttaattatcgcgcgcgcaactatcccggcacgctggat
gaagcagagcaggaacgctggttacagcatcggcgcaacgtgtttacgccggagtttctt
aatagctacgcccaggagctggagatgctttacggtcagtatgaagggaatgctgagaag
caggcgctgctgaaagcgctgttccagtatgcgcaagaaattgtctga
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