Sinorhizobium numidicum: PYH37_002224
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Entry
PYH37_002224 CDS
T09000
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
enu
Sinorhizobium numidicum
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_002224 (addB)
Enzymes [BR:
enu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYH37_002224 (addB)
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PYH37_002224 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
IRX15_IRX15L_GXM
Motif
Other DBs
NCBI-ProteinID:
WEX77439
LinkDB
All DBs
Position
1:complement(13213..16404)
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AA seq
1063 aa
AA seq
DB search
MPGQASNVFTIPAGLPFLKTLAQKLCDGMLVPGFSYDPADPLVLAGVTIFVPTRRSARVL
RSEFVDLLGGRSAILPMIRALGEADDDSGFFDAEVPAILDLAPPLSGPPRLIELGRLILA
WRNRLPQAVLDVHAESPLIAPASPADAIWLARNLADLIDAMETEELAWDALDGLDAGEHA
LWWQLTLAFLKIARTYWPERLDELKHSSPARHRNAILQAETQRIAAGKVSGPIIIAGSTG
SIPATASLIAAVKTLPNGTIVLPGLDHTMSDAEWDLIVGDTPSGKHPASAAKDPASRSHP
QYGFHRLLKRMSIERGDVPELEAADSDLAFRAAVLSQALLPAKATDSWTQTRESFDPGEL
SAAFADVSLIEAANEREEAAAIAIALRLALEGDDESQAALITPDRGLARRVGAELARFGI
EADDSAGIPLSATSVGTLIRLLLEATLRPDDPVPLIALLKHPLARFGLTAEDFRRGADAL
ELLALRGGTDVADISTLEALLEQALTKQSSDRHSPPWRSRLDEGDMLAARALAGRIASAV
EPLASASVLRRESGRHLSLTLTLADWATRTGRALEAVSIDERGSLGELWASEAGEILATL
LRSIIETEGQLSADGPQWCDIMEALSASEAVKPRSMRHPRVFIFGALESRLQSIDLVVLG
GMNEGTWPGQTSNDPFLSRTMKSGIGLEPPERRIGQLAHDFQMACGTRRLIFSRSMRQGS
APTVASRWLQRLQALGGKKLTLQLKSRGSDYLHWARLLDAGERQPLAERPAPKPPADLQP
RTYSFSEVTRLRRDPYAIYARRILRLQPIDPFNRDPGAAERGMLYHRIVDRFVKGNFDPG
SPQAEEAMARLINEAFDEEGLPPHIDTIWRPRFAAVGKAFLSWERERRHNILKSFTEVPA
AMDLGFSNLRLTGIADRLDRLKDGTVDIIDYKTGSSPSIKEARALLDPQLALEAAALKAG
AFRAVGPARPHSLRYVRLKPGSRFKVDTVNNEGSRSKETKTADQLAEESFSELKKLLSAL
MSGRHGFASRLLVQKERDYGGEYDHLARVAEWATAEGEDDDEE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggccaagcttcgaacgtcttcacaatccccgccggcctgccgttcctgaaaacg
ctggcgcagaaactctgcgatggcatgctcgttccaggcttcagctacgatccggcagat
ccgttggtgcttgccggcgtgacgatcttcgttcccacccggcgctcggcgcgtgtgctc
cgctctgagttcgtcgacctgctcgggggccgctcggccattctgccgatgatccgcgct
ctcggggaggcggacgatgacagcggcttcttcgatgccgaagtgccggcgattctcgat
ctcgcaccgcctctgtcgggtcccccgcgattgatcgaactcggccgcctcattctcgcc
tggcgcaatcgcctgccccaggcggtactcgacgttcacgccgaaagcccgctgatcgcg
cccgcaagcccggccgatgccatctggttggcgcgcaatcttgccgatctgatcgatgcg
atggaaacggaggagctggcttgggatgcgctcgacgggctcgacgccggcgaacatgcg
ctctggtggcaactgacgctcgccttcctgaagatcgcccggacctattggcccgagcgg
ctggacgaactcaaacattcctcgccggctcgccaccgcaacgccatcctccaggcggaa
acgcagcgcatcgccgccggcaaggtaagcggaccgatcatcattgccggctcgacgggt
tcgatcccggccaccgcctcgctgattgcagcggtcaagacgctgccgaacggcaccatc
gttctgcccggcctcgaccatacgatgagtgatgcggagtgggacctgatcgtcggcgat
accccgagcggcaagcatcccgcctccgcagcaaaagacccggcgagccgaagccacccg
caatacggctttcaccgcttgctcaagcggatgagcatcgaacgtggagacgtgcccgag
ctggaggcggccgacagcgatctcgcctttcgtgccgctgtcctttcgcaagcgctgctt
cccgccaaagccacggatagttggacgcagacccgcgaaagcttcgatccgggggagctt
tcggcagcatttgcggatgtatcgctgatcgaggcggccaatgagcgcgaggaagcagcg
gcgatcgccattgcgctgcggctggcgctcgaaggcgatgacgagagccaggccgccctg
ataactccggatcgcggccttgcgcgccgcgtcggggcggaactcgcccggttcggtatc
gaggccgatgattccgccggcatcccgcttagtgcaacatcggtaggtaccctgatacgc
ctgctgcttgaagcgactttgcggccggatgatccggtgcctctgattgctcttctcaag
catccgctggcgcgcttcggcctgactgccgaggatttccggcgtggcgccgatgcgctg
gaactgcttgcgctacgcggcggaaccgacgtggccgatatttcgacgctggaagccttg
ctcgagcaggcgcttacaaagcaaagctcggaccggcattcgccgccgtggcgaagccgc
ttggacgagggcgacatgcttgcggcgcgtgcactcgctggacgaatcgcatccgctgtc
gagcccctggccagcgcctccgttctccggcgggaaagcgggcgccatctttcgctgacc
ctgaccttggcggattgggcaacgagaaccgggcgcgcgctggaggccgtctccatcgat
gagcgcggcagcctcggcgaactctgggcttcggaagccggcgagatattggcaacgctg
ctcaggagcattatcgagacggaagggcagttgagcgcagacgggccacagtggtgcgac
atcatggaggcgctttccgcgagcgaagcggtcaagcctcgatcgatgcggcatccgcgc
gtcttcattttcggcgcactggaatcgcgccttcaaagcattgacctggtcgtgctcggc
ggcatgaacgaaggcacgtggccgggacaaacctcgaacgatccgttcctgtcacggacc
atgaagtcgggtatcggcctcgaaccgccggaacgccgcatcggccagctcgcccatgat
ttccagatggcatgcggaacacgccgactgattttctcccgttctatgcgccagggatcg
gcaccaacggtcgcctcgcggtggctgcagcggctgcaggcgctcggtggcaaaaaactg
acgctgcaactgaagagcaggggtagcgattatctccattgggcgcgccttctcgatgcg
ggcgaacgccagccgctggccgagcgtccggcgccgaaaccgccggccgatctgcagccg
cgcacatactccttcagcgaggtgacacgccttcgccgcgatccctacgccatttacgcg
cggcgtatcctgcggctgcagccgatcgacccgttcaatcgcgatcccggcgcagccgaa
cgggggatgctgtatcaccggattgtcgatcgcttcgtaaagggcaatttcgaccctggc
tctccgcaggcggaagaggcaatggcgcggctcatcaacgaggccttcgacgaggaaggc
cttcctccgcacatcgataccatatggcggccgcgcttcgccgccgtcggcaaggctttc
ctgagctgggaaagggaacgcaggcacaacatcctcaagtcttttaccgaggtgcctgca
gcgatggatctcggcttctcgaatctccggctaaccggcatcgccgaccgcctcgatcgg
ctcaaggacggaacggtcgacatcatcgactacaagaccggatcgagcccctcgatcaag
gaagcgcgcgctttgcttgatccccagctcgccctcgaggcggccgcgctcaaggccggt
gcattccgagcggtcggcccggcgcggccgcattcgctccgctatgtccggctgaagcct
ggcagccgcttcaaggtcgacaccgtcaataatgagggaagcagatcaaaggagaccaaa
accgccgatcaactggcggaagaatccttctccgaattgaagaagctgttgagcgccctg
atgagcggaaggcacggctttgcctcgcgcttgctcgttcagaaggagcgggactacggg
ggcgaatacgatcacctggcgcgcgtcgccgaatgggcaaccgccgaaggcgaggatgac
gatgaagaatga
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