Sinorhizobium numidicum: PYH37_002377
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Entry
PYH37_002377 CDS
T09000
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03030
DNA replication
enu03410
Base excision repair
enu03420
Nucleotide excision repair
enu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYH37_002377 (polA)
03410 Base excision repair
PYH37_002377 (polA)
03420 Nucleotide excision repair
PYH37_002377 (polA)
03440 Homologous recombination
PYH37_002377 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enu03032
]
PYH37_002377 (polA)
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_002377 (polA)
Enzymes [BR:
enu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYH37_002377 (polA)
DNA replication proteins [BR:
enu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PYH37_002377 (polA)
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PYH37_002377 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYH37_002377 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WEX77572
LinkDB
All DBs
Position
1:173666..176680
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVT
PTHFAVIFDYSSKTFRNTLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKDGYEA
DDLIATYARLAEEAGADVTIVSSDKDLMQLVTSRVSMYDSMKDKRIAIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLETLLARASEIKQQKRRESIIANA
ELARLSRELVTLKNDTPLDVPLEELRLHSQDGPKLIAFLKTMEFNALTRRVAAATDTDAE
AIEPAYVPIEWGIEAHGPDLDIGEAAGPPPSPASSSVAPPRGEAAKAAVSFLTGGEDVDA
TGATPQGLAQARAQYFATAPFDHSSYVAIRDLDTLDRWIADARDAGVVGFETGTNSIDAM
RADLVGFSMAIADYGVSPSGAKIRAAYVPLIHKNGVGDLLGGGLVENQVPVREALSRLKM
LLEDPSVLKVAQDLKYDYLVMKRHGITMQSFDDVMLASYVIDAGNADHGMDSLSERWLSH
KPIAYKDITGSGRSSLTFDFVNVDKATAYAAENADVTLRLWHVLKPQLASKGLVRVYERL
ERPLVAVLARMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDI
LFGKMGLPGGSKTKTGQWSTSAQVLEDLAATGYDLPRKIVDWRQLTKLKSTYTDALPGFV
HPETKRVHTSYALAATTTGRLSSSEPNLQNIPIRTAEGRKIRTAFVATPGHKLVSADYSQ
IELRVLAHVAEIPQLRQAFADSVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEAGDYIKRYFERFPGIRDYMENTKAFAREHGYVETIFGRRAHYPDI
RSSNPSLRAFNERASINAPIQGSAADIIRRAMIKMEPALEEAKLSARMLLQVHDELIFEV
EETEIERTIPVIVSVMENAAMPALNMRVPLKVDARAAHNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggtgatcatctcttcctcgtcgacggctccggcttcatcttccgggcgttc
catgccatcccgccgctgaaccgcaagtccgacggcttgccggtcaatgcggttgcgggc
ttctgcaacatgctctggaagctcctgaccgatgcgcgcgatacgtctgtcggcgtgacg
ccgacacatttcgctgtgatcttcgactactcctcgaagaccttccgcaacacgctttat
gaccagtacaaggcgaaccggaccgcgccgccggaggacctgattccgcagttcgggctg
atccggcacgccacccgcgccttcaacttgccttgcatcgagaaggacggctacgaggcg
gacgatctgatcgccacctatgcgcggcttgccgaggaggcgggcgccgatgtcaccatc
gtctcttcggacaaggacctgatgcaattggtcacctcccgggtgtcgatgtatgacagc
atgaaggacaagcggatcgcgattcccgacgtgatcgagaagtggggtgtgccgccggag
aagatgatcgatctccaggcgatgaccggcgactcgaccgacaacgtaccgggcatcccc
ggcatcggcccgaagacggcggcccagctcttggaggaatatggcgacctcgagacgctg
ctcgcgcgagccagcgagatcaagcagcagaaaaggcgcgagagcatcatcgccaatgcc
gagctcgcgcgcctgtcccgcgagctcgtcacgttgaagaacgacacgccgcttgatgtt
ccgctcgaagagctgcggctgcattcgcaagacggtccgaagctcatcgcctttctgaag
acgatggaattcaacgcgctgacgcgccgcgtcgccgctgcgaccgatacggatgcggag
gcgatcgagccggcttacgtcccgatcgaatggggcatcgaagcccatgggccggatctc
gacatcggggaggccgccggcccgccgccgtcgcctgcatcgtcgagcgtcgccccgcca
cgcggagaagcagcgaaagctgcggtttcgttcctgaccggcggggaagacgtcgatgcg
acgggcgcgacgccgcaagggcttgcacaggcgcgcgcccaatacttcgcgacggcaccc
ttcgatcattccagctatgtcgccatccgcgatctcgatacgctcgaccgatggatcgcc
gatgctcgcgatgccggtgtggtcggtttcgaaacggggacaaactcgatcgatgccatg
cgcgcggacctggtgggattttcgatggcgatcgccgattacggcgttagcccatcgggc
gccaagatccgggcggcctatgtgccgttgatccacaagaatggcgtcggcgacctgctc
ggcggcggcctcgtggaaaatcaggtaccggtgcgcgaggccttgagccggctcaagatg
ctgctggaggacccgtcggtgctgaaggtcgcccaggacctgaaatacgattacctcgtg
atgaagcggcatgggatcaccatgcaaagcttcgacgacgtcatgctggcgtcctatgtg
atcgatgccggcaacgctgaccacggcatggattcgctttcggagcgctggctcagccac
aagccgatcgcctataaggacattaccggcagcggcaggtcgtcgctcacgttcgacttc
gttaatgtcgacaaggcgacggcttatgcggctgagaacgcggatgtgacgctcaggctc
tggcacgtgctgaagccgcagctcgcttcgaaagggctggtgcgcgtctacgagcgcctc
gaaagaccgctggttgccgttcttgcccgaatggaggagcgcggcatcaccgtcgatcgc
cagatcctctcccgcctttccggggaactggcgcaaggtgccgcggcgctcgaggacgag
atctaccgtctggccggcgagacctttaccatcggctcgccgaaacagctcggcgatatt
cttttcggcaagatggggctgccgggcggatcgaagaccaagaccgggcaatggtcgacc
tccgcccaggtcctcgaagatctcgcggccaccggctacgacctgccgcgcaagatcgtc
gactggcggcaactgaccaaactgaaatccacctataccgatgcattgccgggcttcgtc
catccggaaacgaagcgcgtgcatacgtcctacgcgctggccgcgaccacgaccggacgt
ctctcctcgtcggaaccgaacctgcagaacatcccgatacgcacggccgaaggccgcaag
atccgcaccgccttcgtcgcgaccccgggtcacaagctggtttcggcggactacagccag
atcgagctccgggtgctggcgcatgtggcggagattccccagcttcgtcaggccttcgcc
gatagtgtcgacatccacgcgatgacggcgtcagaaatgttcggggttcctgtcgacggc
atgccgagcgagattcgccgccgcgcaaaggcgatcaatttcggcatcatctatggtatc
tccgccttcggcctcgccaaccagctttcaatcgaacgctcggaagcgggcgattacatc
aagaggtatttcgaacgcttccccggcattcgcgactatatggagaacaccaaagccttc
gcccgcgagcacggctatgtcgagacaatcttcggccggcgcgcccattatccggatatc
cgctcgtccaacccgtcgctgcgtgccttcaacgagcgcgcctcgatcaacgcgccgatc
cagggctcggccgccgacatcattcgccgcgccatgatcaaaatggagccggcactcgag
gaggcgaaactctccgcccgaatgctgcttcaggtccacgacgaattgatcttcgaagtc
gaagagactgaaatcgagcgaaccatccccgtgatcgtgtcggtgatggagaatgcggcg
atgcctgcactcaacatgagggtgccgctgaaggtcgacgctcgcgccgcgcacaactgg
gacgaggcgcattga
DBGET
integrated database retrieval system
