Sinorhizobium numidicum: PYH37_002488
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Entry
PYH37_002488 CDS
T09000
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PYH37_002488 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_002488 (xseA)
Enzymes [BR:
enu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PYH37_002488 (xseA)
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PYH37_002488 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WEX77673
LinkDB
All DBs
Position
1:282755..284341
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AA seq
528 aa
AA seq
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MSTFFDSDSPSNVTEYSVSELSGSIRRTIEQNFEHVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVIWKSAFSRLKFRPEEGMEVIATGRVTTFPGSSKYQIVIETLEPAGAGALMAL
LEERKRKFAAEGLFDAARKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVIVWPV
RVQGDGAGDEVAAAIQGFNALETSGPIPRPNVLIIARGGGSLEDLWCFNDEAVVRAAATS
GIPLISAVGHETDWTLIDYAADQRAPTPTGAAEMAVPVKADLEAQVANLAARLKGVATRQ
MDNRRQALRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERVAAHLRA
DLLRTRIRDRRRHLLEAMNRVERCVERQLDRRQSRVSAADASLRALPSRLVGQIHRASDR
IRGLGARADAAMAAETRRLKGALVAQDRVLQSLSYRNILQRGFALVRDEAGEPVKQAAAV
APGMALSLEFSDGRVSAVASDGGAPPSPQSPKKRPTRPPEPTKQGSLF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgttcttcgattccgattctccgtcgaatgtcaccgaatattcggtgtcggag
ctttccggctcgatcaggcgcacgatcgagcagaacttcgagcatgtccgcgtgcggggc
gagatttccggctatcgtggcccgcattcgtcgggccacgcctattttgcgttgaaggac
gatcgcgcccgcatcgacgcggtcatttggaagagcgccttttcgcggctgaagttccgc
ccggaagaggggatggaggtgatcgcgactggcagggtgacgacctttccgggctcgtcg
aaatatcagattgtcattgagacgttggagccggcgggtgcgggcgcgctgatggcgctg
ctcgaggagcgcaagcggaaattcgcggccgaaggcttgttcgatgccgctcgcaagcgg
ccgctgcccttcatgccgaaggtgatcggcgtcgtcacctcgccgaccggtgccgtcatc
cgcgacatcctgcatcgcatcgccgatcggttcccggtccatgtcatcgtctggccggtg
cgcgtccagggcgatggggccggcgacgaggttgcggccgccattcagggcttcaatgcg
ctggagacgagtgggccgatcccgcggccgaacgttctgatcatcgcgcgcggcggcggc
agcctcgaggatctctggtgcttcaacgacgaggcggtagtgcgcgcagcggccacctcc
ggcatcccgttgatctcggccgtgggtcacgagacagactggacgctgatcgactatgcg
gccgaccagcgggcgccgacgcccacaggtgccgccgagatggcggtgccagtgaaggcg
gacctcgaggcgcaggtcgccaatcttgcggcgcggcttaagggggtcgccacgcggcag
atggacaaccggcgccaggcgctgcgttcgctcgcccgcgccctgccgtcgctcgaccaa
ttgctggcgctgccacggcggcgcttcgacgaggcggccgccggtctcggccgggggctg
cagatgaacacggcgaacaaacgccgaagcttcgaacgcgtcgccgcccatctccgggcc
gatctgctgaggacaaggatacgcgatcgtcgtcggcatcttctggaggctatgaatcgc
gtcgagcggtgcgtggagcgtcaactcgatcgccggcagtcgcgtgtttctgccgccgac
gcttcactccgggcgctcccttcgcggcttgtggggcagatccatcgggcatcggaccgt
atccgcggtctcggggcacgcgcggatgcggcgatggccgctgagacgcgcaggctcaaa
ggcgcgctggtggcgcaggaccgtgtcctgcaatcgctttcctatcgcaatattctgcag
cgcggtttcgcgctcgtgcgcgatgaggccggcgaaccagtgaagcaggcagccgcggtc
gcacctggaatggcgctctcgcttgagttttcggatggccgcgtctcggcggtcgctagc
gacggcggtgctccgccttcaccgcaatcgccgaaaaaacggccgacgcgaccgccggaa
ccaacgaagcagggcagcctgttctag
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