Sinorhizobium numidicum: PYH37_002590
Help
Entry
PYH37_002590 CDS
T09000
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
enu
Sinorhizobium numidicum
Pathway
enu02020
Two-component system
enu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PYH37_002590 (rpoN)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PYH37_002590 (rpoN)
09142 Cell motility
02040 Flagellar assembly
PYH37_002590 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enu03021
]
PYH37_002590 (rpoN)
Transcription machinery [BR:
enu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PYH37_002590 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WEX77767
LinkDB
All DBs
Position
1:complement(381076..382653)
Genome browser
AA seq
525 aa
AA seq
DB search
MALSASLHLRQSQSLIMTPQLMQSIQLLQMTHLELNQFIAQEVEKNPLLECQSGDEMVIP
QDRAGREEAASLSVDTGSDTGSDADEAGTQRDLYDSATSSTGERLSEQLDADFANVFPDD
TTPQRADAPELLGQWKSMPGGGDGDNGEGYDLDDFVAGRKTLREALLEQLPFALGTPGDR
LIAQHLIDQLDEAGYLHADLRETAARLGAATEDVTRVLLVLQQFDPPGVFARSLSECLAI
QLRARDRLDPAMDALVANLELLARRDFASLKKICGVDEEDLIDMLAEIRKLDPKPGTSFE
TCVSEAIIPDVTVRAAPNGSWLVELNPDALPRVLVNHDYFAEISRGTQKNSADQAFLSEC
LQNANWLTRSLDQRARTIMKVASEIVRQQDAFLVNGVDHLRPLNLRIVADAIKMHESTVS
RVTSNKYMLTPRGLFELKYFFTVSIGSAENGDAHSAESVRHRIRTMINQESAGAVLSDDD
IVESLKQAGVDIARRTVAKYREAMNIPSSVQRRREKRALAKAAGF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtccgccagccttcatttgcgacagtcgcagtcgctgatcatgacaccgcaa
ctgatgcagtcgatccagctgctgcagatgacccatctggagctcaatcagttcatcgcc
caggaggtcgagaagaatccgctgctcgaatgtcagtccggcgatgaaatggtaatcccg
caggatcgcgccggccgcgaggaagcggcatccctctccgtcgacactggcagcgacacc
ggaagcgacgcggacgaggctggcacccagcgcgacctttacgatagcgccacatcgagc
accggcgagaggctcagcgaacagctcgacgccgacttcgcaaacgtcttcccggacgac
acgacgccgcagcgcgccgatgctccggagttgctcggccaatggaaatcgatgcccggc
gggggcgacggcgacaatggcgagggatacgatctcgacgattttgtcgccggccgaaaa
actctgagggaggcccttctcgaacaacttcccttcgcgctcggcacgcccggagaccga
ctgattgcccaacatctcatcgaccagctcgatgaagcaggctacctgcacgccgacctg
cgggagacggcggccaggctcggcgcggcgacagaagacgtgacgcgcgtgctgctcgtc
ctgcagcaattcgatccgccgggcgtcttcgcacgcagcctcagcgaatgtctcgccatt
cagctgcgcgcgcgcgaccgcctcgatccggcgatggacgcgctcgtcgccaatctggag
cttttggcgcgccgcgatttcgccagcctcaagaaaatctgcggcgttgacgaggaagat
ctgatcgacatgctcgccgaaatccgcaagctcgacccgaaaccgggcaccagcttcgaa
acctgcgtcagcgaggcgatcatacccgacgtcaccgtacgcgcggcgccgaacggtagc
tggctggtcgaactcaatcctgacgccctgccccgggttctcgtcaatcacgactatttc
gccgagatctcgcgcggcacccagaaaaacagtgccgaccaggcctttctcagcgaatgc
ttgcagaatgccaactggctgacgcgcagcctcgaccagcgcgccaggacgatcatgaag
gtggcgagcgagatcgtcaggcagcaggacgcctttctcgtcaacggcgtcgaccacctg
cgcccactcaacctcagaatagtcgccgacgcgatcaagatgcatgaatcgacggtgagc
cgagttacatcgaacaaatacatgctgacgcctcgcgggctattcgaattgaagtacttc
ttcaccgtttcgatcggctcggccgagaatggggatgcacactcggcggaatccgttcgt
catcggatccgcacgatgatcaatcaggaaagcgcaggcgcggtgctttccgacgacgac
atcgtcgagagcttaaagcaggccggcgtcgacatcgcccggcggaccgtcgccaaatat
cgcgaggcgatgaacataccttcctccgtccagcgacggcgcgagaagcgggcactcgcc
aaggctgccggcttctga
DBGET
integrated database retrieval system
