Sinorhizobium numidicum: PYH37_003172
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Entry
PYH37_003172 CDS
T09000
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu00260
Glycine, serine and threonine metabolism
enu01100
Metabolic pathways
Module
enu_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PYH37_003172 (betA)
Enzymes [BR:
enu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
PYH37_003172 (betA)
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GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
DAO
NAD_binding_8
Lycopene_cycl
F420_oxidored
Pyr_redox_2
Thi4
ApbA
FAD_binding_3
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WEX78297
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Position
1:complement(1001988..1003637)
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AA seq
549 aa
AA seq
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MQADFVIIGSGSAGSALAYRLSEDGKHSVIVLEFGGSDFGPFIQMPAALAWPMSMNRYNW
GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAKGWAYADVLP
YFKRMENSHGGEEGWRGTDGPLHVQRGSLRNPLFRAFIEAGKQAGFEATEDYNGSKQEGF
GLMEQTTWHGRRWSAASAYLKPALKRSNVQLIRCLAHKIVIENGRATGVEIERNGRTEVV
KANREVIVSASSFNSPKLLMLSGIGPAAHLREMGIEVEVDRPGVGQNLQDHMEFYFQQVS
TKPVSLYSWLPWFWQGVAGAQWLFFKSGLGISNQFEACAFLRSAPGVKQPDIQYHFLPVA
ISYDGKAAANSHGFQVHVGYNLSKSRGDVTLRSPDPKADPVIRFNYMSHPEDWEKFRHCV
RLTREIFGQTAFDLYRGPEIQPGEKVQTDEEIDAFLREHLESAYHPCGTCKMGAKDDPMA
VVDPETRVIGVEGLRVADSSIFPHITYGNLNGPSIMTGEKAADYILGKQPLARSNQEPWI
NPRWALSDR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagattttgtcatcatcggttccggctcggcaggctcggcgcttgcctatcgt
ctctcggaagacggcaagcattcggtcatcgtgctggagttcggcggctccgatttcggc
ccgttcatccagatgccggcggcccttgcctggccgatgagcatgaaccgctacaattgg
ggctatctctccgagccggaaccgaacctcaacaaccggcgcatcaccgcgccgcgcggc
aaggtgatcggcggctcctcctcgatcaacggcatggtctatgtccgcggccatgcggag
gatttcaatcgctgggaagagctcggcgccaagggctgggcctatgccgacgtgctgccc
tatttcaagcggatggaaaattctcatggcggcgaagagggctggcgcggtaccgacggg
ccgctgcatgtccagcgcggcagcctcaggaatcccctcttccgcgccttcatcgaagcg
gggaaacaggcaggcttcgaggctaccgaagactataacggttcgaagcaggaaggcttt
ggcctgatggagcagacgacctggcacggccgtcgctggtcggccgcttccgcctatctt
aagccggcactgaaacggtccaatgtccagctcattcgttgcctcgcccataagatcgtc
atcgagaatggccgggcaacgggcgttgagatcgaacgcaacggccggacagaagtggtg
aaggccaatcgcgaggtgatcgtctcggcgtcgtccttcaattcgccgaaactgctgatg
ctctcgggcatcggtcctgcagcgcatctaagagagatgggtatcgaggtggaggtcgac
cgcccgggcgtcggccagaatctccaggaccatatggaattctatttccaacaggtcagc
accaagccggtctcgctctattcttggctgccgtggttctggcagggcgtggcgggggcg
caatggctcttcttcaaatccggccttggcatttccaaccagttcgaggcctgcgccttc
ctgcgctcggctcccggcgtcaagcagccggacatccagtaccacttcctgccggtggca
atcagctatgacggcaaggcggcggcgaactcgcacggctttcaggtgcatgttggctac
aacctgtcgaaatcacgcggcgacgtcacgcttcgctcccccgatccgaaagccgatccg
gtcatccgcttcaattatatgagccatccggaggactgggagaaattccgccattgcgtg
cggctgacgcgcgagatcttcggccagacggccttcgacctctatcgcggcccggaaatc
cagccgggagaaaaagtccagacggacgaggagatcgacgccttcctgcgcgagcacctg
gaaagcgcctatcacccttgcggcacatgcaagatgggtgcgaaggacgacccgatggcg
gtggtggatccggaaacgcgggtgatcggtgttgaaggactgcgtgtcgccgattcctcg
atctttccgcacatcacctatggcaatctcaacggcccctcgatcatgaccggcgaaaag
gccgccgattacattcttggcaagcaaccgctcgcccgctccaaccaggagccttggatc
aatccgagatgggcgttgagcgaccggtga
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