Sinorhizobium numidicum: PYH37_003533
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Entry
PYH37_003533 CDS
T09000
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03030
DNA replication
enu03430
Mismatch repair
enu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYH37_003533 (dnaE)
03430 Mismatch repair
PYH37_003533 (dnaE)
03440 Homologous recombination
PYH37_003533 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enu03032
]
PYH37_003533 (dnaE)
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_003533 (dnaE)
Enzymes [BR:
enu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYH37_003533 (dnaE)
DNA replication proteins [BR:
enu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYH37_003533 (dnaE)
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYH37_003533 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
WEX78627
LinkDB
All DBs
Position
1:1373451..1376948
Genome browser
AA seq
1165 aa
AA seq
DB search
MASDEGVGQGVTGAADPQFVHLRVHSAFSLLEGALPLKKIIGKAVADDQPAIGIADTNNL
FAALEFSQKAAEDGLQPIIGCQLSIDMEDEAEGERRGHSQHLARLPAVVLIAATDEGYVR
LVDLVSRAYLDGEGSHAVRITRSWLADGGTDGLMALTGAGGGPVDMALKAGSPALAEARL
KALIELFGNRLYVELQRHGNFDRRHENRMIDLAYRLDVPLVATNEPFFPSPSDYDAHDAL
MAVAHNAMVSDDSRFRLTPDHYLKSRKEMAALFADLPEALETTVEIARRCSFILKTRGPI
LPRFTGASDDPEEAGRAEAAELRRQAEEGLENRLAKLGMAPGYKEEDYRERLAFELGVIE
RMKFPGYFLIVSDFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQKKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEAEKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDF
VAKRGIHIDLASIPLDDTKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRARFVDGAVKNGVSKPQADLIFDLLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTDKINDFRQDAMRLGIQVSAPSVQSSFRHF
ETGDNRIYYSLAAIKGVGESAVEHIVAVRGDRPFASLEDFCLRIDPKLLNRRVFESLIAA
GAFDCFGYDRAELIGGLDRILGFAQRAQENKVSGQSDMFGAGAATGPEKIALPAYTPWLA
SEKLHREFQVLGFYLSAHPLDTYNKLLAKMRVQTFADFAAAVKQGATAGRLAGTVTSKQE
RKTRTGNKMGIVAFSDASGQFEAVLFSEMLHQYRDLLEPGKSLVMTVAAEERPEGIGLRI
QTLRSLEEESLQMQKALRVYVRDAGPLRSIASHLNTKGDSLVSFVVIKDNGQREIEVELS
EKYRISPEIAAALRSAPGVVDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgatgaaggcgttgggcagggcgtgacgggtgcagcagatccgcagttcgtt
catctgcgcgtgcattcggcattttcgctgctcgaaggcgccctgccgctgaagaagatc
atcggcaaggctgtcgcggacgaccagcctgcgattggtattgccgacaccaacaatcta
ttcgctgcccttgagttttcgcagaaggccgcggaagacgggttgcagccgatcattggc
tgccaactgtcgatcgacatggaggatgaggcggaaggcgagcgacgcggccacagtcag
catctcgcaaggcttcccgcggtcgttttgatcgccgcgacggatgagggctatgttcgc
cttgtggatcttgtcagccgcgcttacctagatggcgaaggcagtcatgcggtgcgcata
acacgctcgtggctcgccgatggcggtacggatgggttgatggcgctgaccggcgccggc
ggcggcccggtcgacatggcgctcaaggcgggctcgccggccctggctgaagcgcgcctg
aaggcattgatcgagcttttcggcaatcggctttacgtagagttgcagcggcatggcaac
tttgatcgtcgtcacgaaaatcgcatgatcgatcttgcctatcggcttgatgttcctctc
gtcgcgaccaacgaacccttctttccatcgccgtccgattatgacgctcatgatgcgctg
atggccgtcgcccataacgcaatggtgtccgacgacagccgtttccgcctgacgcccgat
cattacctgaagagccgcaaggagatggcggctctgttcgccgatctgcccgaagcgctg
gaaaccactgtcgaaatcgcccgccgctgctcgtttatactgaaaacccgcggtccgatc
ctgccgcgctttaccggtgcatcggacgatccggaggaggccgggcgcgccgaagctgcg
gagttgcgccgccaagcggaggaggggctcgagaatcgtctggcaaagcttggcatggcg
cccggctacaaggaggaggattatcgggagcggctggctttcgaactcggcgttatcgag
cggatgaagtttccgggctatttcctgatcgtttcggacttcatcaaatgggccaagcag
catgatattccggtcggccccggccgcggctcgggcgccggatcgctggttgcttatgcg
ctgacgatcaccgacgtcgatccgatgcgtttctcactgctgttcgagcggttcctcaac
ccggaacgcgtgtcgatgccagactttgatatcgacttctgccaggatcgccgcgaagaa
gtcatccgctacgtccagaaaaaatacggtcgtgagcaggtagcccagatcatcaccttc
ggttcactgcaggcgcgtgcagccctgcgcgacgtcggtcgggtgctcgaaatgccctat
ggccaggtcgataagatctgcaagctcgtgccgaacaacccggcgaacccgacgccactt
tcgaaggcgattgaagaggagccgcggctgcaggaggaggcggaaaaggagccggttgtc
gctcggcttcttgacatagcgcagaagattgagggcctctaccgccacgcctcgacgcat
gcggccggcatcgttatcggcgaccggcctctgtcgcaactggtgccgatgtaccgcgat
ccgcgttccgacatgccggttacccagttcaacatgaaatgggtggagcaggccgggctc
gtcaaattcgacttcctcggcttaaagacactgacggtcctgaagaccgcggtcgatttc
gtcgccaagcgcgggattcacatcgatctcgcgagcatcccgctcgacgacacgaagact
tatgagatgctgtcgcgcggcgaaacggtcggcgtgttccaagtggaaagcgccggcatg
cgcaaggcgctgatcggcatgcgtcccgactgcatcgaggacatcattgcgctggttgcg
ctctaccgccccggcccgatggaaaacatcccggtctacaatgcccgcaagcacggcgag
gaagagatcgaatcgatccatccgaagatcgactatctgctcaaggaaacgcagggggtt
atcgtctaccaggaacaggtgatgcagatcgcccaggtgctctcgggctattcgctcggc
gaggccgaccttctgcgccgcgcgatgggcaagaagatcaaggcggagatggaccagcag
cgtgcccgcttcgtcgacggcgccgtcaagaacggcgtgtcgaagccgcaggccgatctg
attttcgatcttctcgcgaagttcgcgaactacggcttcaacaagtcgcatgcggcagcc
tacgccatcgtttcctaccagaccgcctatatgaaggcgcactatccggtcgagtttcta
gctgcctccatgacgctcgacatgtcgaacacggataagatcaacgacttccgtcaagac
gcgatgcgcctcggcattcaagtgagtgccccctcggtgcagagctccttccgccatttc
gagaccggcgacaatcgcatctattattcgctcgccgcgatcaagggcgtgggcgaatcg
gcggtcgagcacatcgttgcggttcgcggcgatcgccccttcgccagccttgaggatttc
tgcctcaggattgatcccaaactcttgaacaggcgtgttttcgaaagcctgattgccgcc
ggcgctttcgattgcttcggatatgaccgggccgagctgatcggagggcttgaccggata
cttggcttcgcccagcgcgcccaggaaaacaaggtgagcgggcagagcgacatgttcggt
gccggcgctgcgaccgggccggaaaagatcgctctgcctgcctacacgccctggctcgcc
tcggagaaattgcaccgggagtttcaggtcctgggcttctacctttccgcccatccgctc
gatacctacaacaaactgctggcgaagatgcgcgtgcaaacgtttgcggattttgccgcg
gctgtgaaacagggggcgacggcaggcaggcttgcgggaacagtgacgtcgaaacaggag
cgcaagacgcgcaccggcaacaaaatgggtatagtcgccttctcggacgcttcgggccag
tttgaagccgtgctcttttcggagatgctgcaccagtaccgcgacctgctggaacccggc
aaatcgctggtgatgaccgtggcggcggaagagcggccggagggcattggccttcgcata
caaaccttgcgatctctagaagaggaatcgctgcagatgcagaaggcgctgcgcgtctat
gtacgcgacgccggacccctccgctcgatagcctcccatctgaataccaagggcgacagt
ctcgtttcctttgtcgtcatcaaggataacggccagcgggagatcgaggtcgaactcagc
gagaaatatcggatctcgcccgagatcgccgccgcacttcgctccgcgcccggcgttgtc
gacgtcgaacttgtctag
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