Sinorhizobium numidicum: PYH37_003626
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Entry
PYH37_003626 CDS
T09000
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYH37_003626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enu03021
]
PYH37_003626
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_003626
Enzymes [BR:
enu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYH37_003626
Transcription machinery [BR:
enu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PYH37_003626
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PYH37_003626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
WEX78710
LinkDB
All DBs
Position
1:1460439..1461449
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVDFASAGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFEEPHKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaattggcaggaattgatcaagccgaataaggtggacttcgcctccgcc
ggccgcaccaaggcaacgttggtcgcggaaccgctcgagcgcggctttggtctgacactc
ggcaacgcgcttcgccgcgtgcttttgtcgtcgctgcgcggtgctgccgttacggcagtg
cagatcgacggcgtgctgcacgagttctcgtctatcccgggcgtccgggaagatgtgacc
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgatgcaaagcgc
atggtcgtgcgcaagcagggtccgggcgtcgtgacggccggtgacattcagacggttggc
gatatcgaaatcctcaatccgaaccatgtgatctgcacgctcgacgagggcgccgagatc
cgcatggagttcaccgtcaacaacggcaagggctacgtaccggctgaccgcaaccgctcg
gaagacgcgccgatcggcctcatcccggtcgacagcctctactcgccggtcaagaaggtc
tcgtacaaggtggaaaacacccgcgaaggccaggttcttgactatgacaagctgacgatg
tccatcgagacggacggctcggtcactggtgaggatgcgatcgcttttgcggcccgcatt
cttcaggaccaactgtcggtcttcgtcaacttcgaagagccgcacaaggaagcagaggaa
gaggcagtcaccgaactcgccttcaacccggcgcttctcaagaaggtcgacgaactggag
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaatttcggccgcaagtcgctcaac
gagatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccgtcctgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccaatactaa
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