Sinorhizobium numidicum: PYH37_003768
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Entry
PYH37_003768 CDS
T09000
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PYH37_003768 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_003768 (xth)
Enzymes [BR:
enu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PYH37_003768 (xth)
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PYH37_003768 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WEX78839
LinkDB
All DBs
Position
1:complement(1602946..1603737)
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AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARIDGLVAWLKASNPDIACLQEIKAVDEAFPRSEIEALGYHVETHGQK
GFNGVALLSKLRPDEVNRGLPGDDSDEQSRFIEGVFSVSGGAIRVCCLYLPNGNPVSTEK
YAYKLGWMQRLAGFAEQRLRLEEPLILAGDYNVIPEAHDCWDVKVWQNDALFLPETRAAF
RRLRNLGFTDAVRATSDEVPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAADKLLSTSIEK
HVRSWEKPSDHVPVAGEFAFELE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaatatcaacggcgtcaaggcgcggatcgacggtctcgtcgcg
tggctgaaggcatcgaatcccgacattgcttgcctgcaggagatcaaagcggtcgatgag
gcgtttccgcggagcgagatcgaagccctcggctaccatgtggagacgcacggacagaag
ggcttcaacggcgtcgccctgctttcgaagctgcggccggacgaggtcaatcgcgggctg
ccgggagatgattcggacgagcagtcgcggttcatcgaaggcgtcttttccgtcagcggc
ggggctattcgtgtgtgctgcctttatctgccgaacgggaacccggtgagtacggaaaaa
tatgcctataaactcggatggatgcagcggctggcaggcttcgccgagcagagactgcgg
ctcgaggaaccgcttatcctcgcaggcgactacaatgtcattccggaagcccatgactgc
tgggacgtcaaggtctggcaaaatgacgcgctcttcctgcctgaaacgcgggcggcattc
cggcgccttcgcaatctcgggttcaccgacgcggtgcgcgcgacctcggacgaagtgccg
ctctattcattttgggattaccaggcgggatgctggcagaagaatttcggcatccggatc
gaccatctgatgctgtcgccggaagcggccgacaagctcctgtcgacatcgatcgaaaag
cacgtccgatcgtgggaaaaaccgtccgatcacgttccggtcgcaggggagtttgcgttc
gagctcgagtaa
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