Sinorhizobium numidicum: PYH37_004343
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Entry
PYH37_004343 CDS
T09000
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu00860
Porphyrin metabolism
enu01100
Metabolic pathways
enu01240
Biosynthesis of cofactors
Module
enu_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PYH37_004343 (cobN)
Enzymes [BR:
enu01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
PYH37_004343 (cobN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Thrombin_light
LD_cluster3
Motif
Other DBs
NCBI-ProteinID:
WEX76073
LinkDB
All DBs
Position
1:complement(2197276..2201526)
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AA seq
1416 aa
AA seq
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MHLLLAQKGTIADGNEAIDLGQSPADILFLSAADTELASIAAAHRQRPGARSLRIASLMS
LMHPMSVDTYVERTARHAKLIVVRPLGGASYFRYVLEALHAAAVTNKFQIAVLPGDDKPD
PGLAPFSTVPPEDRQRLWAYFTEGGADNAGLFLDYAEALITGGEKPEPARPLLKAGIWWP
GRGVIDIGAWMRLASGGEKIPPSALPGISPTRGENTEASARSLTAVELQASPSEADGSVI
SNGNQGTSGGRAAISPLVGERPGRAEGDGQSDALAPPTIAICFYRALVQSGEIKPVEALI
EALAAEGMRALPVFVSSLKDQISIGTLQAIFAQAAPDVVMNATGFAVSAPGADRQPTVLE
STGAPVLQVIFSGSSRDAWEASPQGLMARDLGMNVALPEVDGRILSRAVSFKAASTYDAA
VEANIVGHEPLADRVRFAARLAANWARLRRAKPKARRVAIIMANYPNRDGRLGNGVGLDT
PAGTIEVLKAMAAEGYVVGDVPEDGDALMRFLMAGPTNAASRDRETRETISLNQYKEFLD
SLPKKIQQEVTERWGMPQADPFFLDGVFALPLARLGEVIVGIQPARGYNIDPKETYHAPD
LVPPHGYLAFYAYLRQVYCADAIIHMGKHGNLEWLPGKALALSELCYPEAVFGPMPHLYP
FIVNDPGEGTQAKRRTSAVIIDHLTPPLTRAESYGPLKDLEALVDEYYEAAGGDPRRLRL
LSRQILDLVRDIGLDQDAGIEKGDSENKALEKLDAYLCDLKEMQIRDGLHIFGVAPEGRL
LTDLTVALARVPRGLGEGGDQSLQRAIAVDAGLGALGHVPLSALPDISPARGEMRDASSR
PPNAVEAEISPTVDGAVISDKGAVISDGTWGRGGGRTPISPLAGEVPGRAEGGMSPQSQP
FDPLDCLLSAPWTGSKPDLLATLSDAPWRTAGDTVERIELLAAKFVSGEIACPVGWSATR
AVLDQIEARLKPAIVGSGEAEIRGLRTGLDGRFVAPGPSGAPTRGRPDVLPTGRNFYSVD
SRAVPTPAAYELGKKSAELLIRRYLQDHGEWPSSFGLTAWGTSNMRTGGDDIAQALALIG
AKPVWDMASRRVTGYEIVPLAVVGRPRVDVTLRISGFFRDAFPEQIALFDKAIRAVGALE
EDDADNMIAARMRAETLRLEEMGVETKEAARRASYRVFGAKPGAYGAGLQALIDEKGWEQ
RSDLADAYLTWGGYAYGAGEDGRAERGLFEERLRSIEAVVQNQDNREHDLLDSDDYYQFE
GGMSAAAEHLTGTRPSIYHNDHSRPEKPVIRSLDEEIGRVVRARVVNPKWIEGVMRHGYK
GAFEIAATVDYMFAFAATTGAVRDHHFEAAYQAFIADERVRDFLRDKNPAALTELAERFL
ETIDRDLWNPRSNSARFELMELAARPAANRQRAGNE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcttctcgcccagaaaggaacgatcgccgacggaaacgaggcaatcgatctc
gggcaaagcccggctgacatcctgttcctgtcggccgccgatacggagcttgcctcgatt
gccgccgcccatcggcagcggccgggggcgagaagtctgcgcatcgccagcttgatgagc
ctcatgcatccgatgtcggtcgacacttatgtcgagcggacggcgcgccatgccaagctg
atcgtcgtacgtccgctcggcggcgccagctatttccgttacgtgctcgaggcgttgcat
gcggcggccgtcaccaacaaattccagatcgcggttctgcccggcgacgacaagccggat
cccgggcttgcccccttttccacggtaccgccggaggaccgtcaacgcctctgggcctat
ttcaccgaaggcggcgccgacaatgcgggcctgtttctcgactatgccgaggcactgatt
accggcggcgaaaagcccgagccggcgcggccgctgctgaaggccgggatatggtggccg
gggcggggcgtgattgatatcggcgcgtggatgcgccttgcgagcggcggtgagaaaata
cccccctcggccctgccgggcatctcccccacacggggggagaacacggaggcaagtgct
cgctccttaacggcagtcgaattgcaggcaagcccctcagaagctgatggctctgtcatt
tccaacggaaatcagggaacgagcggcggccgcgcggcgatctccccccttgtgggggag
aggcccggcagggcagagggggatggccaatctgatgctctcgcacccccaaccatcgcc
atctgcttctaccgcgcccttgtccaaagcggtgaaatcaaacccgtcgaggcgctgatc
gaggcgcttgcggccgaaggcatgcgggcgctgccggtgttcgtgtcgagcctcaaggac
cagatctccatcggcacgcttcaggctatcttcgcgcaagccgcgccggacgtcgtcatg
aacgcaaccgggtttgccgtttccgcacccggcgccgatcgtcagccgacggtgctggaa
tcgactggcgcgccggtgctgcaggtgatcttttccggctcttcgcgcgacgcctgggag
gcctcgccgcaggggctgatggcgcgcgacctcggcatgaatgtcgcactgccggaggtg
gatggccgcatcctttcccgcgccgtttccttcaaggccgcatctacctatgacgcggcc
gtcgaggccaatatcgtcggccatgagccgctggcggaccgtgtccgctttgccgcccgg
cttgccgccaattgggcaagactgcgccgggcgaagcccaaagcgcgccgcgtcgcgatc
atcatggccaattacccgaaccgcgacgggcggctcggcaacggtgtcggtctcgacacg
ccggctggcaccatcgaggtgctgaaggcgatggcggcggagggctatgtcgtcggtgat
gtgccggaggacggagatgcgctgatgcgcttcctgatggcggggccgaccaatgcggcg
agccgcgaccgcgaaacccgtgaaacaatttcgctaaatcaatacaaggagttcctcgac
tctcttccgaaaaagattcagcaggaagtgaccgagcgctggggtatgccgcaagccgat
cccttcttcttggatggtgtcttcgcgctgccgctcgcccgcctcggtgaggtgatcgtc
ggcattcagccggcgcgcggctacaatatcgatcccaaggaaacctatcacgcgccggac
ctcgtgccgccgcacggctatctcgccttctatgcctatctacgccaggtctattgcgcc
gacgccatcatccacatgggaaagcacggcaaccttgaatggctgcccggcaaggcgctg
gcgctttccgagctttgctatcccgaggcagtcttcgggccgatgccgcatctctacccc
ttcatcgtcaacgatccgggcgagggcacgcaggcgaagcgccgcacgagcgcggtgatc
atcgaccatctcacgccgcctttgacgcgggccgaatcctacggtccgctgaaggatttg
gaagctctggtcgatgaatattacgaggccgcgggcggcgatccgcggcgcctgcggctg
ctcagccggcagattctcgacctcgtccgcgatatcggtctcgaccaggatgcgggcatc
gagaagggcgacagtgagaacaaggcgctggaaaagctcgacgcctatctttgcgatctg
aaggagatgcagatccgcgatggcttgcacatctttggcgtggcgcctgaggggcggctg
ctgacagacctcaccgttgcgctcgctcgtgtgccgcgcggtctgggcgaaggcggcgac
cagagcctgcagcgggcgatcgcggtggatgcggggttgggtgctcttggccatgtaccc
ctctctgccctgccggacatctcccccgcaaggggggagatgagggatgcgagctctcgc
ccccccaacgccgtcgaggccgagatttcgccgacggttgacggtgcggtcatttccgac
aagggtgcagtcatttccgacggcacttggggaagaggcggtggccgcacgccaatctcc
ccccttgcgggggaggtgcccggcagggcagaggggggtatgtcccctcagtcgcaaccc
ttcgaccccctcgattgcctcctctccgcaccctggacgggctcgaagcccgatcttctc
gcgaccctctcggatgccccctggcgcacggccggcgacaccgttgagcgcatcgagctc
ctcgctgcgaagttcgtctccggtgaaatcgcctgcccggttggctggtctgcgacccgt
gccgtgcttgatcaaatcgaagctcgcctgaagcccgccatcgtggggtctggcgaagcc
gaaatcagagggctgcggaccgggctcgacggccgcttcgtcgcgcccggcccctccggt
gcgccgacgcgcggccgtccggacgtgctgccgacggggcgcaatttctactccgtcgac
agccgcgccgtgccgacgccggcagcctatgagctcggtaaaaagtccgccgaactgctt
atccgccgctatctgcaggaccatggcgaatggccgtcatccttcgggctaaccgcctgg
ggtacgtccaacatgcgcaccggcggcgacgacattgcccaggcgctggccttgatcggg
gcaaagccagtctgggacatggcctcgcgccgcgtcacgggttacgaaatcgtgccgctc
gccgtggtcgggcggccgcgcgtcgacgtcaccttgcgcatttccggctttttccgcgat
gccttcccggaacagatcgcgctttttgacaaggcgatccgcgccgtcggggctctggag
gaggacgacgccgataacatgatcgcagcgcgcatgcgtgcggagacgctgcggttggaa
gaaatgggcgtcgagacgaaagaggctgcacgccgcgcatcctaccgcgtctttggcgcc
aagcccggagcctatggcgccggtttgcaggcgctgatcgacgaaaaggggtgggaacaa
cgcagcgatctcgcggacgcctatctcacctggggcggctatgcctacggcgccggcgag
gacggcagggctgagcgcggcctcttcgaggagcgccttcgttcgatcgaggcagtcgtc
cagaaccaggacaaccgtgaacacgatctcctcgacagcgacgactattaccaattcgag
ggcggcatgagcgctgccgccgagcatctcaccggcacgcgtccgtcgatctaccacaat
gaccattcgcggccggaaaagcctgtgatccgttcgctcgatgaagaaatcggccgcgtg
gtgcgtgcacgcgtcgtcaatccgaaatggattgagggcgtgatgcgccacggctacaag
ggcgcgttcgagatcgcggcgaccgtcgattacatgttcgccttcgccgcgacgacggga
gcggtgcgcgaccatcatttcgaggccgcctaccaggccttcatcgccgatgagcgcgtg
cgcgacttcctgcgcgacaagaacccggctgcccttaccgaactggccgagcgttttctg
gaaacaatcgatcgggacctctggaacccgcgctccaactccgcgcgctttgaattaatg
gaactcgcagcgaggccggccgccaaccggcagcgggcgggaaacgaatag
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