Sinorhizobium numidicum: PYH37_004613
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Entry
PYH37_004613 CDS
T09000
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
enu
Sinorhizobium numidicum
Pathway
enu03420
Nucleotide excision repair
enu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYH37_004613
03430 Mismatch repair
PYH37_004613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enu03400
]
PYH37_004613
Enzymes [BR:
enu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYH37_004613
DNA repair and recombination proteins [BR:
enu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYH37_004613
MMR (mismatch excision repair)
Other MMR factors
PYH37_004613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WEX76315
LinkDB
All DBs
Position
1:2461986..2464556
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AA seq
856 aa
AA seq
DB search
MSKGFDDIPFFDEEPAPRKPAPAGGGIAARAMAARDKAQRPDYLAGLNPEQTEAVETLEG
PVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGHAVE
GMPWLGTFHSIGVKLLRRHAELVGLRSNFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQF
AGMIDTWKNKGLDPSQIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLLLHPIRMF
RANPDVLKDYHDKFRYILVDEYQDTNTAQYMWLRLLAQRPRSSERTGAGNPGESRASEGW
PDDVSSAPAERSRSSGDSVSANKQQQINICCVGDDDQSIYGWRGAEVDNILRFEKDFPGA
KVIKLERNYRSTEHILGTAAHLIAHNEGRLGKTLFTERTNPDDEKVHVHAAWDSEEEARA
IGEEIEQLQRGKHNLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAM
AYFRLVCQPADDLAFERIVNTPKRGLGDTTVRTLHDYARARDIPMLSAAAEIIETDELKP
KARKALFDVVTDFRRWQTLLETTPHTELAEQILDESGYTAMWQADKSAEAPGRLENLKEL
IRSMEAFESMRGFLEHVALVMDAEQNEDLDAVSIMTLHSAKGLEFDTVFLPGWEEGLFPH
QRSLDEGGRAGLEEERRLAYVGITRAKHRCHIWFVSNRRIHGLWQSTLPSRFLDELPIDH
VEVAEQEVSYGGYGRGGYGQSRFDKADPFENSYQTPGWKRAQQHRSEATRDNWGTRSGHA
IERIGYGESGPRTRTIDGELVAKSTTAEPSRFNVGDRVFHIKFGNGNIAAIEGNKLTIDF
DRAGQKRVLDGFVERV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggttttgacgacattcccttcttcgacgaggagccggcgccgcgcaagccc
gcgcctgccggcggcggcatcgccgcgcgcgccatggccgcccgcgacaaggctcaacgg
ccggactatctcgccggcctcaatccggagcagacggaagccgtcgaaacgctcgaaggt
ccggtgctcgtgctcgccggcgccggcaccggcaagacccgcgtgctgaccacccgcatc
gcccatattctttccaccggccgtgcctacccctcgcagatcctcgccgtcaccttcacc
aacaaggccgcacgcgagatgaaggagcgcatcggcgtgctcgtcggccatgcggtcgaa
ggcatgccctggctcggcaccttccactcgatcggcgtcaagctcctgcgccgccacgcc
gagctcgtcgggttgaggtccaatttcaccattctcgataccgacgacgtcgtgcggctg
atcaagcagctcatccaggccgaagggctcgacgacaagcgctggcccgccaaacaattc
gccggcatgatcgacacctggaagaacaagggcctcgatccctcgcagattcccgagggc
gatgcccgcgccttcgccaacggcaagggccgcgagctctacgcggcctatcagaaccgg
ctgctgacgctcaacgcctgcgacttcggcgatctcctgctgcacccgatccggatgttc
cgcgccaatccggacgtcctgaaggactatcacgataagttccgctacatcctcgtcgac
gagtaccaggacaccaacaccgcgcaatatatgtggctgcggctgctggcgcagcggcct
cgctcgtcagagcgaactggcgcaggaaatccgggcgaatcccgagccagcgaaggctgg
ccggacgacgtttcgtccgcccccgcggagcgcagccgctcaagcggcgacagcgtgagc
gcaaacaaacagcagcagataaacatctgctgcgtcggcgacgacgatcagtcgatctat
ggctggcgcggcgccgaggtggacaacattctccgtttcgagaaggacttccccggcgcc
aaggtcataaaactcgagcgcaactatcgctcgaccgagcacatcctcggcaccgccgcc
cacctgatcgcccataacgagggtcgtctcggcaagacgctgttcaccgagcgcaccaac
ccggacgacgagaaggtgcatgtgcacgccgcctgggactccgaagaggaagcccgcgcc
atcggcgaggagatcgagcagcttcagcggggcaagcacaatctcaacgacatggcgatt
ctggtgcgcgcctcgttccagatgcgcgaattcgaagaccgtttcgtcacgctcggtctt
aactaccgcgtcatcggcggcccgcgcttctacgaacggctcgaaatccgcgatgccatg
gcctatttccgcctcgtctgtcagcccgccgacgacctggccttcgagcgtatcgtcaac
acgccgaagcggggtttgggcgacaccacggttcgcaccctgcacgactatgcccgcgcc
cgcgacatccccatgctttccgccgctgccgaaatcatcgagaccgacgaattgaagccg
aaggcgcgcaaggcgctcttcgacgtcgtcaccgatttccggcgctggcagacgctgctc
gaaacgacgccgcatacggaactcgccgagcagatcctcgacgagagcggctacacagcc
atgtggcaggccgacaaatcggccgaagcgccggggcgcctggaaaacctgaaagaactc
atccgctcgatggaggcgttcgagtcgatgcgcgggtttctggaacacgtcgcgctcgtc
atggatgccgaacagaacgaggatctcgacgccgtttcgatcatgacactgcattcggcc
aagggcctggaattcgacaccgtgttcctgccgggctgggaggaaggcctcttcccccat
cagcgttcgctcgacgaaggcggccgagccggcctcgaggaagagcgccgcctcgcctat
gtcggcatcacccgcgccaagcaccgctgccatatctggttcgtctcgaaccgccgcatt
catgggctctggcaatcgacgctgccctcgcgcttcctcgacgaactgccgatcgatcat
gtggaagtggccgaacaggaagtctcctacggcggttacggccgcggcggctatggccag
tcgcgcttcgacaaggccgatcctttcgagaactcctatcagacaccaggctggaaacgc
gcgcagcagcaccgctcggaggcgacccgcgacaattggggcacccgctccggccacgct
atcgaacggatcggctacggcgaatcaggcccgcgcacccgcaccatcgacggcgaactg
gtcgccaaatcgacgaccgccgaaccctcacgcttcaacgtcggcgaccgcgtcttccac
atcaagttcggcaacggcaacatcgccgccatcgaaggcaacaagctgacgatcgatttc
gatcgcgcgggtcagaagcgggtgctggacgggtttgtggagcgcgtgtga
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