Enterobacter sp. JBIWA008: KGP24_14825
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Entry
KGP24_14825 CDS
T11584
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
env Enterobacter sp. JBIWA008
Pathway
env03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
env00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KGP24_14825 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
env03400
]
KGP24_14825 (sbcB)
Enzymes [BR:
env01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
KGP24_14825 (sbcB)
DNA repair and recombination proteins [BR:
env03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KGP24_14825 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KGP24_14825 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KGP24_14825 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UAN43189
LinkDB
All DBs
Position
3085020..3086447
Genome browser
AA seq
475 aa
AA seq
DB search
MVSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNIIGEPEVFYCKPADDYLPQ
PGAVMVTGITPQEAREKGVNEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNIFYRNF
YDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEEGLTSFRLEHLTRANGIEHSNA
HDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLTTLIDVPQMKPLVHISGMFGAWR
GNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLPAVPIKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDNPQVREKVVAIFAEAEPFVPS
ENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNYRARNYPGTLD
EAEQDRWLQHRRNVFTQEFLNSYAQELEMLYGQYEGNAEKQALLKSLFQYAQEIV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ctggtgtctgactctgccgctcgcccgacttttttgttccacgactacgaaacctttggc
actcacccggcgctggaccgaccggcgcagtttgccgccatccgtaccgacgacgaattc
aacatcattggcgagcctgaggtcttttactgcaaaccggctgatgactacctgccgcag
cccggggcggtcatggttaccggcattacgcctcaggaagcgcgggaaaaaggcgttaac
gaggctgaattcgcccgacgcatccacgatctgtttaccgttcccaatacctgcgtggtt
ggttacaacaacattcgcttcgatgacgaagtaacgcgcaacatcttctatcgcaacttc
tacgatccctatgcctggagctggcaaaaccgtaattcgcgctgggacttgctcgacatc
atgcgcgcctgttatgccctgcgtcctgagggcattaactggccggaaaatgaggaagga
ctgacgagcttccggctggaacacctgacgcgcgccaacggcatcgagcacagcaatgct
cacgacgcgatggcggacgtctatgccaccattgccatggcgaagctggtgaaaaccgcc
cagccccgactgtttgagtatctgctgagccaccgcagtaaacaaaaattgaccacgctg
attgacgttccacaaatgaagccgctggtgcatatttccggcatgtttggcgcctggcgc
ggcaataccagctgggtcgctccgctggcgtggcatccggacaaccgtaatgcggtcatc
atggtggatttagccggcgatatttcgccgctgcttgagctcgacagcgataccctgcgt
gaacggctttataccccgaaaaatgaactcggcgatctgcctgcggtaccgatcaaactg
gtgcatatcaataaatgtccggtactggcgcaggcgaatacgctgcgtccggaagatgcg
gacaggctgggcatcaaccgtcagcactgcctcgataatctgaaagtgctgcgcgataat
ccgcaggtgcgcgaaaaagtggttgctatctttgccgaggcggagccgttcgtgccgtcc
gaaaacgtggatgcccagctctacaacggcttcttcagcgatgccgatcgcgcggcgatg
aatatcgttctgcaaaccgagccgcgcaacttaccggcgctggatatcaccttcgccgat
aaacgcatcgaaaagctgatgtttaattaccgcgcgcgtaactaccccggcacgctggac
gaggcagagcaggatcgctggctgcagcatcgtcgcaatgtctttacccaggagtttctt
aacagctatgcccaggagctggaaatgctttatggccagtatgaagggaatgctgagaaa
caggcactgttgaaatccctgttccagtacgctcaagagattgtctga
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