Enterobacter sp. JBIWA008: KGP24_18650
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Entry
KGP24_18650 CDS
T11584
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
env Enterobacter sp. JBIWA008
Pathway
env03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
env00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KGP24_18650 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
env03400
]
KGP24_18650 (recD)
Enzymes [BR:
env01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KGP24_18650 (recD)
DNA repair and recombination proteins [BR:
env03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KGP24_18650 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
MukB
UvrD_C
T2SSE
ATPase
CbiA
SRP54
NPHP3_N
DO-GTPase1
DEAD
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UAN40100
LinkDB
All DBs
Position
complement(3885518..3887338)
Genome browser
AA seq
606 aa
AA seq
DB search
MTMQALLLDAVEQRLLRHLDVQFAMMVAGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVD
ETMPPALQACFALLGDAVDWQGILLGSPAVSGADTGTPMILVGERLYLNRLWRNELTVAR
FFSETNAPLPCDEVKLRQTLDALFTSDDATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQKCRIRLAAPTGKAAARLTESLGGALQKLPLTGEQLALFPNEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTYASLGYTAERAQELARLTGCSLTSENHSLAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRRTTTAVFDGTFSDIEKKSLQSGEEYQAMLDDALQGYQHFLTG
VQQQSTPEQVIAAFGEYQLLCALREGPFGVRGLNDRLEQLLAQKRKINRTPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVITRELIYTAITRARQRLSLYTDERVLVQAIATRTERRSGLS
AIFESL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggcgctactgctggacgcggttgaacaacgattactgcgccacctggat
gtgcagttcgccatgatggtggctggtgaggagcctgccgtcatgcttgccgccgccatt
ctgagcaaagacgcgggggaggggcacgtgtgtctgccgctgtcgcgtctggcggtggat
gagacgatgcctccggctttacaggcgtgtttcgcgctgctgggtgacgctgtggactgg
caggggatattactcggctcgcctgccgtgagcggagccgataccgggacgccgatgatc
cttgtcggcgagcgtttgtatctcaaccggctgtggcgtaacgaactgacggtggcgcgc
ttcttcagcgagaccaacgccccgcttccgtgcgatgaagtaaagctccggcaaacgctg
gatgcgctttttacctctgacgacgcgacagactggcagaaagtggcggcagccgtggcc
ttaacgcgacggatctcggtgatttctggcggcccgggtaccgggaaaacgaccaccgtg
gcaaaactgcttgctgcgctgattcagttatcgggtgagcaaaagtgccgtattcgcctg
gcggccccaaccggtaaagcggcggcacgtctgacggaatcgttaggcggcgcgctgcaa
aaactgccgctaaccggggagcagcttgcgctttttcccaatgaagccagcaccctgcac
cgtttgcttggggcacagccgggtagccagcgtctgcgctatcatgccggtaacccattg
caccttgacgtgctggtggtggatgaagcatcgatgattgacctgacgatgatgtcgcgg
ttgatcgatgcgctaccgccgcacgcgcgcgtcattttcctcggcgatcgcgaccagctt
gcctccgttgaggccggggctgtgctgggcgatatctgcacgtatgccagcctgggatat
accgctgaacgcgctcaggagctagcccgtctcaccggatgttcgctcacgtctgaaaac
cattcgcttgcaggggcgctgcgcgacagcctgtgtctgctgcaaaaaagctatcgtttc
ggaagcgactccggcatcggccagcttgcggcggcagtgaaccggggcgaccggcgcaca
accactgcggtatttgacggtaccttctcggatattgagaaaaaatcgctgcaaagcggg
gaagagtatcaggcgatgctggacgacgccctgcaggggtaccagcactttctgacgggc
gtacaacagcaaagtacgccggagcaggtcattgccgcgttcggcgaataccagctgctc
tgtgcgttgagggaaggcccctttggcgtccggggtctgaacgaccggctggaacagctg
ctggcgcaaaaacgcaaaattaaccgtaccccgcattcgcgctggtatgaagggcgaccg
gtgatgatctcccgcaacgacagcgcgctggggttgtttaacggggatatcgggattgcg
ctcgatcgcggtcagggcctgcgcgtctggttccagatgccggacggcagcgtgaagtct
ttccagcccagccgtttgcctgagcatgaaaccgcctgggcgatgacggtgcataaatct
cagggctccgagtttaaccatgcggcgctgatcctgcccacgcagctttcacccgtcatt
acccgcgagctgatctacaccgccattacgcgtgcgcgtcagcgcctgtcgctgtatacc
gatgaacgcgtgctggtacaggcgattgccacccgaacggaacgccgaagcgggctgagc
gcgatatttgagtccctctga
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