Endozoicomonas sp. SCSIO W0465: MJO57_00215
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Entry
MJO57_00215 CDS
T08210
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
enw
Endozoicomonas sp. SCSIO W0465
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_00215
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
MJO57_00215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
Zn_ribbon_3
AAA_30
SLFN-g3_helicase
AAA_16
AAA_22
DUF7577
AAA
zf-tcix
ERCC3_RAD25_C
DZR
Motif
Other DBs
NCBI-ProteinID:
USE36709
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All DBs
Position
complement(52951..54747)
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AA seq
598 aa
AA seq
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MVYQLRPYQKDAVQRVIRHFRKSDAPALLVLPTGAGKSLVISELARIARGRVLVLAHVKE
LVEQNHAKYESYGLKASVFSAGLGKKEASEQVIFGSVQSVVRNLEQFQNSPDQKTFTLLV
IDECHRVSLEKNSSYHQVIAHFKSLNPNLKVLGLTATPYRLGMGWLYQYYQSSENKGSVR
TEAPRFFKKCLFELPLSYMVDNGYLTTPEVVDAPIVFYDFSQLSKDSFGRYGEQELNQLL
KGKTRATREIIEQVKRAAATRKGVMVFASTVDHAREIMGYLPEGDSALIIGDTPSKERDR
LIEAFKQQQLKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIAGRGLRLAPGKQDC
LIIDYAGNRFSLYSPEVGEPKPDSQSVPVTVPCPACGNENHFWGVVDSDGDLVEHYGRRC
QGFEVFLDDNGKEVKEQCEFRYRFKECDQCGAENDIAARKCHSCQNGLVDPDKKLREALN
LKNCMVMRCSGMEMSADKDAQGKQRLKITYHDEDGAEVNEFFRLDTPSRQGAFYHHFGKH
ALINRAEPFRASTVDNVIHSRKKFRQPDFVIARKEKYYWKIIDKLFDYDGKYRKAEAL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtctaccagctccgaccttaccaaaaagatgccgttcagcgggtgatacggcatttt
cgcaaatccgatgccccagccctgcttgtactgcccacaggtgcagggaagagcttggtt
atttctgaactggcccgtatcgcccgaggtcgtgttctggtcctcgctcatgtcaaggaa
ctggtcgagcagaaccatgccaaatacgaaagctatggattgaaggcctctgtctttagt
gcaggacttgggaagaaagaagcctctgaacaggtaatttttggcagtgtgcaaagcgtt
gtcagaaatcttgaacagtttcagaactcaccggatcagaaaacattcactctgctggtc
attgatgagtgccaccgggtatctttggagaaaaattccagttaccaccaggtcattgcc
cattttaaaagcctgaatcctaaccttaaggttctcggtttaacagcaaccccttatcgc
ctggggatgggttggttgtatcagtattatcaaagctctgagaataaagggtcggtcaga
acagaagcaccccgttttttcaaaaagtgcctgtttgagctgccactctcctacatggtc
gacaatggttaccttacgacaccagaggtggttgatgcccccattgtcttctatgacttc
agtcaactatccaaagacagctttggacgttatggcgagcaggaactgaaccagttatta
aaaggaaaaacccgggctacccgtgaaatcattgagcaggtaaaaagagcagcagctacc
cgtaaaggtgtcatggtgtttgcatcgacagtagaccatgcccgcgaaatcatgggctac
cttccagagggagatagcgctctgattattggtgataccccatcaaaagaacgggatcgg
ctgattgaagccttcaaacagcagcaacttaaattcctcgtgaatgtctccgtactcacc
accggttttgatgcacctcatgttgacctgattgccatactaagaccaacagaatctgtc
agcctttatcagcagatagctggccgggggctgcgtctcgcacccggcaagcaagactgc
ctgattattgattatgcgggtaaccgcttcagtttatacagccccgaagtcggtgagcca
aaaccggattcacaatcggtaccggtcacggttccctgtcctgcctgtggcaacgagaat
catttctggggagtcgttgatagtgatggtgacctggttgaacactatggacgacgctgt
cagggctttgaggtgtttttggatgacaacggcaaagaagtcaaggaacaatgtgagttc
cgctaccgttttaaagagtgtgaccagtgtggtgctgaaaacgatatcgcggccagaaag
tgtcacagctgccagaacggactggtcgatccggataaaaaacttcgagaggcgcttaac
ctgaaaaactgtatggtgatgcggtgctctggcatggaaatgagtgctgacaaagacgct
caaggcaaacaacgcctgaagatcacctaccatgatgaagatggcgctgaagtaaatgag
ttcttcaggctggatactccatcccggcaaggtgcgttctatcatcattttggcaagcat
gccctgattaaccgtgctgagccattcagggcgtcaacggtggataatgttatccacagc
agaaagaaatttcgtcaacctgactttgtcattgcccggaaagaaaagtattactggaag
atcattgataagctgttcgactacgatggcaaataccgcaaggccgaagcactctga
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