Endozoicomonas sp. SCSIO W0465: MJO57_03930
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Entry
MJO57_03930 CDS
T08210
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJO57_03930 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enw03021
]
MJO57_03930 (rpoA)
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_03930 (rpoA)
Enzymes [BR:
enw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJO57_03930 (rpoA)
Transcription machinery [BR:
enw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJO57_03930 (rpoA)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJO57_03930 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
USE37387
LinkDB
All DBs
Position
938262..939263
Genome browser
AA seq
333 aa
AA seq
DB search
MQNSVTEFLTPRHIDVEEISLTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVQHEYSAIEGVQEDVIEILLNLKGLAIRMTGRDSVTLTLSKNGEGVVTAADIQLDHD
VEIVNPDHVIAHMNDKGKLNMKLKVARGRGYESADSRRQDEEETRAIGRLQLDATYSPVY
RVSYVVESARVEQRTDLDKLVIDLETNGTLDPDEAIRRAATILQQQLAVFVDLEGVSEPE
PVKEEDEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKSDDKVSA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattcggttactgaatttctaacccctcgacatattgatgttgaggaaatcagt
ctgacacgggcaaaggtcaccctggagccgctggaacgtggttttgggcataccttaggc
aatgccctgcgtcgcattcttctttcctctatgcccggctgtgccgtgactgaggtagag
attgatggcgtgcagcatgaatacagtgctattgaaggtgttcaggaagacgttattgaa
atcctgctcaacctgaaaggcctggctattcgcatgactggccgtgacagcgttactctg
actctgagcaaaaacggtgagggtgtcgtcaccgctgctgacatccagctggatcacgat
gttgaaatcgtgaatcctgatcatgttattgcccacatgaatgacaagggcaagctcaac
atgaagctgaaggttgctcgtggtcgtgggtatgaatcagccgacagccgccgtcaggat
gaagaggaaactcgcgctatcggccgtctgcagttggatgccacctatagccctgtatac
cgtgtttcctatgtcgtagaaagtgctcgtgtagaacagcgtactgacctcgacaagctg
gttatcgacctggaaaccaatggtaccctggatcctgatgaagccatccgtcgcgctgct
actattctgcagcagcagttggcggtgtttgtggatctggagggtgtgtccgagccagag
ccggtgaaggaagaagatgaggttgatccaattcttcttcgtccggttgatgatctcgaa
ctgacggtacgtagtgcaaactgcctgaaggcagagaatatctactacattggtgacctg
atccagcgcactgaagttgagttgctcaagaccccgaacctgggtaagaagtccctgact
gagatcaaggatgttctggcctcccgtggtctgagcttgggtatgcgtctcgacaactgg
ccacctgccagtttgaagagtgacgacaaggtttctgcttaa
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