Endozoicomonas sp. SCSIO W0465: MJO57_13180
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Entry
MJO57_13180 CDS
T08210
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MJO57_13180 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_13180 (xseA)
Enzymes [BR:
enw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MJO57_13180 (xseA)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MJO57_13180 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Birna_RdRp_C
RecJ_OB
Cdc6-ORC-like_ATPase_lid
Motif
Other DBs
NCBI-ProteinID:
USE39021
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All DBs
Position
complement(3030582..3031979)
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AA seq
465 aa
AA seq
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MHHFTDSFTDNLTDNATNTPAHNIEGPAKALSVTELNGKARRLLEMNFNNVRVEGELSGL
ARPSSGHWYFTLKDKQSQIRCAMFRNRNQSLKFVPTEGMLLMVRGRVSLYEGRGDYQLIV
EHMDNAGTGDLRKAFEVLKTKLAAEGLFDIARKQPLPSHPKHIGVITSPTGAAIRDILTV
MKRRFPAIPVTIIPSAVQGEQAKYELVSAIKLAKNANRFDVLIVGRGGGSLEDLWPFNEE
LVARAIANCPIPIVSAVGHEIDFTIADFVADHRAATPSAAAEILSPDRQAMLNQLHLLSR
KLTTLTRHKLQLCQKETDNLQKRLRHPGDRLRDNSQRLDDLEIRLRQAITLKLERAQSSL
GRVRDRTHQQNPQRKLELLKNRNEHMGQKLIQLVLNCLERRQLKLEKVSGELSAVSPLAT
LSRGYTLTMVGESIIRSSRQLREGERVTTRFSEGKAVCKVEKITC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaccattttactgacagcttcaccgacaacctcaccgacaacgccaccaacacaccg
gctcacaacattgagggacccgcaaaagcgctttctgttacggagttaaatggtaaagcc
aggcgattgctggagatgaatttcaataatgtccgtgttgagggcgaactgtccggactg
gcccgccccagctccgggcactggtatttcaccctgaaggacaaacagtcacagatccgc
tgcgccatgttccgcaaccgtaaccagtcgcttaagtttgtcccgacggaaggcatgctg
cttatggtcaggggacgggtaagcctttatgaagggcgaggcgattatcaactgattgtc
gaacatatggataatgccggcaccggcgacctccggaaagcctttgaagtcctcaagacg
aaactggccgctgaaggcctgttcgacatcgctcgcaaacaacccctaccgtctcatccg
aagcatattggcgtaatcacttcacccacgggagcagccatccgggacattctaaccgta
atgaaaagacgctttcccgccataccggtcacgatcattcccagcgcagttcagggagaa
caggcaaaatacgaactggtcagtgcaataaaactggcaaaaaacgccaaccggtttgat
gtattgatcgttggtcgcggaggtggttcactggaagacttgtggccatttaatgaagag
ttggtcgccagggcgatagcaaactgccctattcccattgtcagcgccgtaggtcatgag
attgacttcaccattgctgactttgttgcagaccaccgggcggcgacgccatccgctgcc
gctgaaatcctcagcccggaccgtcaagccatgttgaaccagctgcacctgctcagcaga
aagctcaccacactgacacgccataagttgcagttgtgccagaaagaaactgataacctg
caaaaacggttaagacacccgggagatcgtctgagagacaacagccagcggctggatgac
ctggaaatccggttaaggcaggccattaccctgaaactggaacgcgctcaatcgagcctg
ggccgggtcagagatcgtacacatcagcaaaacccccagcgcaaattggaacttctgaaa
aatcgtaatgaacacatgggccaaaagctgattcaactggtattaaactgcctggaaaga
cggcaactgaaactggagaaagtgtctggagaattgagtgccgtgagtccattagcaaca
ctttcaagaggctataccctgacgatggtgggagaatcgattatcaggagtagccgacag
ctccgggaaggagaacgggtaaccacacgcttctctgaaggcaaggcggtctgcaaggtc
gaaaaaatcacctgttaa
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