Endozoicomonas sp. SCSIO W0465: MJO57_13365
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Entry
MJO57_13365 CDS
T08210
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MJO57_13365 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_13365 (recD)
Enzymes [BR:
enw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MJO57_13365 (recD)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJO57_13365 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
UvrD_C
DEAD
SLFN-g3_helicase
nSTAND3
AAA_16
CbiA
AAA_28
T2SSE
NTPase_1
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
USE39050
LinkDB
All DBs
Position
complement(3068455..3070458)
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AA seq
667 aa
AA seq
DB search
MLTQLQLLEQQGIIRALDYQFAKLIHAMNPDPLLTLAAANVSFELGQGNVCMTLASDFSI
FGLDETESAQLMDTIAIPKEQWMTNLKNTQVVGEGNEPTPLVLDSECLYLYRYWEYECNI
ARFLKSRSTEALDADEARSMLQRLFKRDYPDIAQRCKGKSEAAQKAELIKWLDIESIDGL
DWDAILDSVNQGADPDTLNSLIPESACLNWQKIAAALAATRSFSVISGGPGTGKTTTVTR
LLALLTELGLKRHSPPDIKLVAPTGKAAARLTESIGGALAKINCSETVREMIPTQAGTLH
RLLGVIPGKTGFIHNKNNRLHLDILVVDEASMIDLPLMSHLLEALPDHARLILLGDRDQL
SSVEAGSVLGDICAAASFGYSNEQRNLLERLTGHDLAKREPTQAKTNHAVSDSLCLLRKS
YRFDAHSGIGNLAKAVNNNDHHALKSVFTSGFDDIARFSIATNPDYQQLIQQSVESYRHY
LELIQQKREPQHILDAFSRFQVLCALREGPYGLSGLNEAIENALQQKGLIEVSGQWYEGR
PVLITRNDHGLGLYNGDIGITIRGSDGQLRIAFQLPYQQVRQFLPSRLPEHETVFAMTIH
KSQGSEFANVVMVLPDKDSPIITRELVYTGITRAKSKLTLFAEMDILIKAAKSPTKRQSG
LYQRLVQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgctaactcagctgcagttactggaacaacagggcattattcgagccctggattatcaa
ttcgccaaactgattcacgccatgaaccccgatccattgctgactctggctgccgctaat
gtcagctttgaattgggacagggcaatgtatgcatgaccctggcatcggacttcagcatt
tttggtctggatgagacagaaagtgctcaactgatggataccattgccattcctaaagag
cagtggatgacgaacctgaaaaacactcaggttgtgggagaaggcaatgagccaaccccc
ctggtgctcgatagtgagtgcctctatctctatcgatactgggaatacgaatgcaatatt
gcccgatttctcaagagtagaagcacagaagcgctggatgcagatgaagcccgctcaatg
ttgcaaagactttttaagcgggattaccccgacatagctcaacggtgtaaagggaagtcc
gaagccgctcagaaagccgaactcattaagtggctggatattgagtccattgacgggctt
gattgggacgccattctggattcggttaaccagggagctgatccagatactctgaattca
ctcattccggagtctgcgtgcctgaactggcaaaaaattgccgcggcattggcggccacc
cgctcattttcagttatcagtggcggcccgggaaccggaaaaaccaccaccgttacccga
cttctggcgcttctcaccgagctgggcctgaagcgccattcacctccggatattaagctg
gttgctcccaccggcaaggctgcagctcgcttaaccgagtccattggtggagcactggca
aagataaactgcagtgaaacagtaagggagatgatccctacccaggccggaacactgcac
cgtttactgggcgtaatccccggaaaaaccggctttatccacaataaaaacaatcggtta
caccttgatattctggttgtggatgaagcttccatgatcgacctgccactgatgagccac
ttactggaagcactgccagatcatgcccggttaattctgttaggtgaccgtgatcaacta
tcgtcagtggaagctggcagtgtccttggtgatatctgtgcagccgccagctttggttac
tcaaatgaacaacgcaatctgctggaaaggttaaccggacatgatcttgctaaaagggag
ccgacacaggctaaaacaaaccacgccgtttccgacagcctttgcctgttgcgcaaaagc
taccgctttgatgctcattcgggtataggcaatctggccaaagcggtaaacaacaatgat
catcacgctttgaagtcagtatttacctcaggctttgatgatatagcgcgcttttccatc
gccacaaaccctgattatcagcaattgatacaacaatctgttgagtcctatcgtcactac
ctggaactcattcaacagaaaagagaacctcagcatattctcgatgcctttagccgtttt
caggtgttatgtgcactgcgggaaggtccatatggtctttcgggtctgaacgaagcaata
gagaacgccctgcagcaaaaaggcctcattgaagtgtctggacaatggtatgaagggcgg
cccgtcctgatcacccgcaatgatcacgggcttggtctttacaatggcgacattggaatt
accatcagaggatctgatggtcaactcaggatcgcttttcagttgccctatcaacaggtc
aggcagtttctgcccagccgacttcctgagcatgaaaccgtttttgccatgaccattcac
aaaagtcagggatctgagtttgccaatgttgtcatggtgttaccggataaagacagtccc
attatcacccgtgagcttgtctatacgggcattacccgagccaaatccaaacttacgctt
ttcgctgaaatggacattttgatcaaagcggcaaagtcaccaaccaaaagacaatcaggt
ctttatcagcggctggttcaataa
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