Endozoicomonas sp. SCSIO W0465: MJO57_13370
Help
Entry
MJO57_13370 CDS
T08210
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MJO57_13370 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_13370 (recB)
Enzymes [BR:
enw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MJO57_13370 (recB)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJO57_13370 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
SLFN-g3_helicase
AAA_11
PUF_NOP9
DUF883
ResIII
Motif
Other DBs
NCBI-ProteinID:
USE39051
LinkDB
All DBs
Position
complement(3070452..3074183)
Genome browser
AA seq
1243 aa
AA seq
DB search
MSRTIATDQTDQTRLIPETLDPHALPLHGVRLIEASAGTGKTYTIANLYLRILLGHGSNK
TQHETPLTVDQILVVTFTEAATGELRDRIRARIHQTRDAFIEGQSSDPFIQRLIRDMKQP
AQCQALLLAAEQQMDEAAIFTIHGFCQRMLKQHAFESGTLFSSELITDTEPMLQLSAADY
WRRNFYPLEKPLVKLLRNLWKTPNDLLGHLRSWLPLSDLKLAGDQVPESMDDFRTIYLAP
ARELKLLWQNDQDRITDLLRSCGLRKDRKPLKRLGDMTRFLASDDLIPNLDKDSWEIYGT
EILQKSLLKTGKLPKHPIFRKIDEFLNLPLSLKEALQGLITRDALHHIKSQLTQLKTSRY
QLSFDDLLTNLANALFAEDNAGELLAQAIRGQYRIAMIDEFQDTDPLQYRIFNKIYMEGG
DPGVGLFMIGDPKQAIYAFRGADIFTYMQARQQVHSHYTLDTNWRSSDAMVSAVNTVFQH
SATPFIYNDSIPFEPVHPSPGASQKRLYHEGAALPAMTLWLQKPNDGPTINAESYLDTMS
QATATEINRLLSAADRGNCQIHNKERQTPLQPGDIAVLVRSGRHGQKIRKALAAQNIASI
YLSNQDSVFTSREASDLEKILQACLHPTSERVLKAALATSLFHLDALALDALNVDEQAWE
SAVEEFTHYGELWRSKGILPMLRQLIFHRKIAEQLLSFQDGERRLTDLLHLGELLAAASL
EQQGAPALTRWFSEQIIRPNHNANDQQLHLESERNLVKIITIHKSKGLEYKVVFIPFPCH
LRKADSPLYHDPKTSETWLALTPSAEASALSEKERLAEDLRLLYVALTRSVYCCYLGMAP
YKSGRASKEGKTDLHQTAIGYLLNQGSDIVSQDLSVLLEQMAGRCDHQQIVISAPPADTL
PPYIPVDSQEPSLSARNFTGNIERNWWTTSYSALSRFSSHRSGSSADAGNEAPGFDTDAI
NEQHNARDNQQAEADPLSLFNFPKGAQPGTFMHSLFEELDMNALRSAEGDAYLNNFLVDS
HARAGYGEEWLPATKGMLLTCLNAPLDGDNLRLINLPDSARRVEMEFYLPIEQLNPQSLN
QLIAQHDPLSARAGELQFHRMKGMLKGFIDLTFEYQGRWYVLDYKSNWLGNNIIDYSRET
MEKVMIEHRYDLQYQLYSLALHRLLRQRVPDYDYDQHVGGVIYLFLRGVQMDDPEQHGVF
SHRPSFELINGLDQLFRGEDVISETKSGKDNEIANEKEELMKC
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagccggacaatagccactgaccagactgaccagacgcgtctgattccggaaaccttg
gacccacacgccttgcccctgcatggcgttcgcctgatagaggccagtgccggcacaggc
aaaacctataccatcgcgaatctctatcttcgaatactgctggggcatggcagcaataag
acacaacatgaaaccccgttaaccgttgaccagatactggtcgttacctttaccgaagca
gccaccggcgagttaagggaccgtatccgggccagaattcaccagacccgggatgccttt
attgaaggccaatccagtgatccatttattcagcgactgattcgggacatgaaacagcca
gcacagtgccaggcgctactgctggccgcagagcagcagatggatgaagcggcaattttc
accatccacggcttctgccagcgcatgctgaaacagcacgcttttgaaagtggcactctg
ttctccagtgagctgattacggatacagagcccatgttgcagctgagtgcagcggactac
tggcgccggaatttctatcccctggaaaaaccactggtgaagctgctgcgcaacctctgg
aaaacgcccaacgaccttctgggtcatttgcgcagctggctgcctctgtcagacctgaaa
ctggccggagaccaggttccggaatccatggatgacttcagaacgatctatctggccccg
gccagagaattaaaattactctggcaaaacgatcaggacaggatcacagacctgttaagg
agctgtggcctgcgcaaagaccgcaaacctctgaagcgactgggcgatatgacccggttt
cttgcctctgatgatctgattcccaatctggataaagacagctgggagatctacggcacg
gaaatattgcaaaaaagtctgttaaagaccggaaaattaccgaaacaccccattttccgg
aaaattgatgagttcctgaatttaccgctatccctgaaggaggcgcttcagggcctgatc
acccgggatgcattgcatcatatcaaatcccagctgacacaattgaaaaccagccgttat
cagctttcctttgatgatctgctgaccaatctggccaacgccctgtttgctgaagataat
gccggtgaactgctggcccaggcgattcgcggtcagtatcgcattgcgatgattgatgaa
tttcaggataccgaccctctgcagtatcgcattttcaacaagatctacatggaaggcggt
gaccccggcgttggcctgtttatgatcggcgatcccaagcaggccatctacgccttccgt
ggcgccgatattttcacctatatgcaggccaggcaacaggtacacagccattacacgctg
gataccaactggcgctccagcgatgccatggtgtctgcggttaatacggtattccagcat
tcggccacgccctttatctacaacgacagcataccttttgagcccgttcatccatcacca
ggtgcctcacagaaacgcctttatcatgagggagcagccctacccgcaatgaccctgtgg
ctgcagaagccaaatgatggaccaaccatcaatgccgaaagttatctggataccatgagc
caggcaactgcgaccgagatcaatcgcctgctttcagctgccgaccgtgggaactgccaa
attcacaataaagaacggcaaacaccgttacaacccggagatattgccgtactggtccgc
agtggtcgacatggtcagaagattcgtaaagccctggccgcacagaatatcgccagtatt
tacctgagcaaccaggactcggtatttacttcacgggaagcgtctgacctggagaaaata
cttcaggcatgcctgcaccccaccagcgagcgagtattgaaagcggcgctggcaacctcg
cttttccatcttgacgctctggctctggacgcactgaatgttgatgagcaagcctgggaa
agcgcagtagaagagttcacgcactatggcgaactctggcggagcaaaggtatcctgccg
atgttgcggcaactgatcttccaccggaaaattgccgagcaactgctctcattccaggat
ggcgagcgccgtctgaccgacctgctgcacctgggcgagctactggcggctgccagcctt
gaacagcagggagcacccgccctgacccgctggttttccgagcagatcatcagaccgaat
cacaacgccaatgatcagcagttgcatctggagagcgagcggaatctggtcaagatcatc
accatccataagtccaaaggcctggaatataaagtggtctttatcccttttccatgccac
ctgcgtaaagcggattcccccctttaccatgatccgaaaaccagtgaaacctggctggca
ttaacaccctccgcagaagcttcagccctttccgaaaaggagcgacttgcggaagacctg
cgcctgctctacgttgccctgacccgctcggtctactgctgctacctgggcatggccccc
tacaaatcaggaagagccagtaaagagggtaaaacggacctgcatcagactgcgattggt
tatttgcttaatcaaggctcggacattgtcagtcaggatctcagcgttttgctggagcaa
atggccgggcgctgtgatcatcaacagatcgtgatttctgcaccaccagcagacaccttg
ccaccgtatattccagtggactcacaagaaccatcgttaagcgcccgtaatttcacagga
aacattgagagaaactggtggaccaccagctactcagcgctttcacggttttcatcacat
cgttccggatcatcggcagatgccggtaatgaagcgccaggctttgatacggatgccatc
aatgaacaacataatgcccgggataaccagcaggctgaagcagaccctttaagcctgttc
aattttcccaaaggggctcaaccgggaacgttcatgcacagcctgtttgaagaactggat
atgaacgcattacgttctgcagaaggtgacgcctatctaaacaattttctggttgatagc
cacgcccgggccggttatggcgaagagtggctgccagccaccaaaggtatgctgctaact
tgcctcaatgcgccactggatggagacaaccttcgtcttatcaatctgccagattccgct
cgacgggttgaaatggaattttacctgcctatcgaacagcttaacccgcagagccttaat
caactgattgctcaacacgaccctctcagtgccagggccggagaactgcaattccatcga
atgaaaggcatgctaaaaggttttattgacctgacctttgaatatcaggggcgctggtat
gtgctcgattacaagtcaaactggctgggcaataacatcattgattattccagggagacc
atggaaaaagtcatgatagagcatcgatacgacctccaataccagctgtactctctggcg
ctgcaccgtctgctcaggcaacgtgtaccggattatgattatgaccagcacgtcggtggt
gtcatttacctgtttctgcgtggggtacagatggatgatcctgagcaacacggcgtattt
agccataggccctcttttgaactcatcaatggcctggatcagctattcaggggtgaggac
gttattagcgaaacaaaaagtggcaaagataatgagatagctaatgaaaaagaggagctg
atgaaatgctaa
DBGET
integrated database retrieval system
