Endozoicomonas sp. SCSIO W0465: MJO57_14745
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Entry
MJO57_14745 CDS
T08210
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enw03032
]
MJO57_14745 (topA)
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_14745 (topA)
Enzymes [BR:
enw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJO57_14745 (topA)
DNA replication proteins [BR:
enw03032
]
Prokaryotic type
DNA Topoisomerases
MJO57_14745 (topA)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJO57_14745 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
USE39305
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Position
3331125..3333767
Genome browser
AA seq
880 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKNFVVKSSVGHIRDLPTAGGPKKAVDAKARARAAAESK
KLSPEERERRKKIKAREQLIERMGIDPDNGWAAHYQILPGKEKVVDELTRLAESADTIYL
ATDLDREGEAIAWHLQQAIGGSPDRYRRVVFNEITKKAIQSAFESPGQLNQDRVDAQQAR
RFLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRSFTPEEYWEVYADLLA
VGNDVVRFQVIKENGASFRPISKAEADKALTQLQQGQYSLTNREDKPTRSKPSAPFITST
LQQAASTRLGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSQDAVESARSFITRQYGDQYC
PVQPNIYSSKEGAQEAHEAIRPSSVTLKPDGLSGMERDAERLYDLIWCQFVACQMTPAEY
LSTSLVVDVKGYQLKARGRTLKFDGYTRVQKPLARKGEDVILPDLQKGVALNLQKLDPKQ
LFTRPPARFSEAALVKELEKQGIGRPSTYASIISTIQDRGYVSVKSRRFYAEKMGDIVTD
RLNESFNELMDYHFTARMEEKLDDIAEGEKNWKQVLDNFYTDFTLQLTQAEQSEGGMRTN
EPSLTDIECPTCHRPMMIRTASTGVFLGCSGYSLPPKERCKTTINLVPGEEVEDADDEYA
EVNALRAMRRCPKCSTAMESYLIDEQRRLHVCGNNPDCSGFEVEKGSYKLKGYDGPVLEC
DKCGSEMQLKTGRFGKYFGCTNSECKNTRKLLKSGEPAPPKMEPVPMPELKCVKVDDHYV
LRDGASGLFLAASQFPKNRETRAPLVAELLPHQAMIDPKYGYLMDAPRQDPDGNPAIIRF
SRKTKQQYVMSELDGKATGWSATYDEGSWNEKQTKKRQSS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctagttattgtggagtcgccagccaaggcgaaaaccatcaacaagtat
ttgggcaaaaactttgttgtcaaatccagcgtgggtcatatccgggatttgccaaccgcg
ggtgggccgaaaaaagccgtggatgcaaaagccagggccagggctgccgctgagtccaaa
aaactctcacctgaggaacgtgagcgccgcaagaaaatcaaagcccgtgagcagttgatc
gagcgcatggggatcgaccctgataatggctgggcagcgcattaccagattctgccggga
aaggaaaaagtcgttgacgaactgacccgtttggctgaaagtgctgacaccatctatctc
gcaacggatttggaccgtgagggagaagccattgcctggcatttgcagcaggctatcggt
ggtagcccggatcgctatcgtcgtgttgtctttaatgaaattaccaaaaaagcgattcag
tctgcctttgaatctcccgggcagttaaatcaggatcgggtcgatgctcagcaggctcgc
cggttcctggaccgtgtcgttggttatatggtttctcctctgctctgggcaaaaattgcc
cgtgggctatctgcagggcgtgttcaatccgttgctgttaagctggtggttgagcgtgag
cgggagattcgcagcttcactcctgaagaatactgggaagtgtatgcggatcttctggct
gtcggtaatgatgtggttcgctttcaggtcattaaagagaatggcgccagtttcaggccg
ataagcaaggccgaagccgataaagcattgactcagcttcagcaggggcaatactccctt
accaatcgcgaagacaagccaacccggagtaaaccctcagcaccctttatcacatcaacg
cttcagcaggcggccagcacccgccttggctttagcgtaaagaaaaccatgatgttggct
cagcgtctctatgaagccggttatatcacttatatgagaaccgattcgaccaatcttagt
caggatgcggtagaaagtgcccggtcctttattacccggcaatatggtgatcagtactgc
ccggtgcaaccgaatatatacagtagcaaggaaggtgcccaggaagcccacgaagcaata
cgcccctccagtgtcacattaaaaccggatggcctctctggaatggagcgtgatgcagag
cgtctgtatgatttgatctggtgccagtttgttgcttgtcagatgacgccggccgagtat
ctcagtacttcgctggtcgtagacgttaagggctatcagctcaaggccagggggcgaaca
ttgaagtttgatggctatacccgggtgcaaaagcctctggccagaaaaggtgaagatgtg
attctgccagaccttcagaaaggtgtggccctgaatctacaaaaactggaccctaaacag
ctgttcacccgacctcctgcccgtttcagcgaagcggcactggtgaaggaattggagaag
cagggcattggccggccgtcaacctatgcgtcgattatctctactattcaggatcgtggt
tacgtttcggtgaagagtcgccgtttttatgctgaaaaaatgggcgatattgtgactgat
cgtttgaatgagtctttcaatgaactcatggattatcactttactgcacgaatggaagag
aaactggacgatattgctgagggtgaaaaaaactggaagcaggttcttgataatttttat
accgattttacgctgcagttgacacaggcggaacagagtgagggagggatgcgtaccaat
gaaccctccctgaccgatattgagtgtccgacttgccatcgcccgatgatgattcgcact
gcatctaccggggtgtttctcggttgctccggttattctttgccaccaaaggaacgctgt
aaaacgacgattaacctggttccgggcgaagaggtggaagatgctgatgatgaatatgcc
gaggttaatgccctacgagcgatgcgtcgttgtcccaagtgctctaccgctatggaaagc
tatctgatagatgagcagagaaggttacacgtctgtggtaataatcctgattgttccggg
tttgaagtggagaaggggagttataagttaaaaggttatgatggtcccgtactcgagtgt
gataagtgcggcagtgaaatgcagttgaaaacggggcgatttggtaaatattttggttgt
actaacagtgaatgcaagaacaccaggaagttgttgaaaagtggtgagccagcgccaccc
aaaatggagccagtgcctatgcctgagttaaagtgtgtcaaagttgatgatcattacgtg
ctcagggatggcgcttccggattgttcctggcggccagtcaatttcccaagaacagggaa
acccgtgctcccttggtggcagaactgttgccacatcaggcaatgattgatcctaagtat
ggttatctgatggatgctccccgccaggaccctgatggaaacccggccattattcgattc
agtcgtaagactaaacagcaatacgttatgtcagagctggatggtaaggcaacgggttgg
agtgctacctatgatgaaggtagctggaatgaaaaacagactaaaaagcgccagtccagt
tag
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