Endozoicomonas sp. SCSIO W0465: MJO57_17775
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Entry
MJO57_17775 CDS
T08210
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03030
DNA replication
enw03430
Mismatch repair
enw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJO57_17775 (dnaE)
03430 Mismatch repair
MJO57_17775 (dnaE)
03440 Homologous recombination
MJO57_17775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enw03032
]
MJO57_17775 (dnaE)
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_17775 (dnaE)
Enzymes [BR:
enw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJO57_17775 (dnaE)
DNA replication proteins [BR:
enw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJO57_17775 (dnaE)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJO57_17775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
USE34014
LinkDB
All DBs
Position
complement(3981096..3984605)
Genome browser
AA seq
1169 aa
AA seq
DB search
MTARFIHLRVHTEFSLSDGLVRIKPLLSAISASGSPAVAVTDQSNLCALVKFYSGAMGAG
IKPICGADLWVENPSDEHAPSRLVLLCMDEQGYHNLTELISRAFMENQRHEKALVKREWI
MTQSEGLIALSGAREGEIGRALLAGKKPLAGQLLQAWMEAFPDRFYLELHRTNRAGDEEC
VHGSVDLAAEFNCPVVATNDVMFMTRDDFEAHESRVCIGESVVLDDPRREHRYSEEQYLK
SEQEMVELFADIPEALANSVAIAQRCSINVKLGEYFLPEYPVPEGKTMDQFFREFSHNGL
TERLAFLFDTSAPDFPETEKLYRDRLDFELNTILQMGFPGYFLIVMDFIQWSKNNGIPVG
PGRGSGAGSLVAYAQKITDLDPIKYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
RTYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEIGMTLSKAFEQEE
AIREFLESDEEAAEIWEMALKLEGVTRNVGKHAGGVVIAPTRLTDFAPLYCDEHGKGVVT
QYDKNDVEYAGLVKFDFLGLRTLTIIDWALKLINPRRAQRGEEPLAIEAIDLEDKSAYDM
LKRAETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFINRKHGRE
ELSFPDAQYQHESLQPILQPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEE
MAKQRTVFEEGAISQGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
SEFMAAVMSSDMQNTDKVVTFIEECRDMGLTVLPPSVNSGEYMFGVNDDGHIVYGLGAIK
GVGEGPIEAIVRARNEGGPFKDLFDFCERVDAKSINKRVLEALIKSGALDLLGPAPEKPG
QLNFNRAVLESSQLEAIKAADQAAKSLDSGHMDMFGALVPAGEEDVYDTYLKTSEWTDKV
RLGGEKDTLGLYLTGHPIDEYESEIRHFIRNRIKDLQPARGDSQNIAGLVVDMRVMKNKK
GDKMAFVTLDDRTGRIEVSVFADVFAEYQHLLHKDAVLVVEGEVTFDDYSGSLKVRSKRV
MKVVDARSHYARRLVLEVSHEQIDGHFGRKLSSMLGEQPGQLPIRIDYRREDACASLMLG
EQWLVSPSDELVLELRQWLGKNAAKVEYA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgatttatccacttacgggtgcataccgaattttccctcagcgacggactg
gtgcggataaaaccgctgctcagcgccatttctgcttctggttctccagcggttgctgtg
actgaccagtctaacctctgtgcgctggtgaagttttattcgggggccatgggagcgggt
atcaagccgatttgtggcgctgatctgtgggtggaaaatccgtcggatgagcatgcaccg
tcccgcctggtgctgctgtgtatggatgagcagggttatcacaatctgaccgagctgata
tccagggcgtttatggaaaatcaacgccatgaaaaagcgctggtcaaacgggagtggatc
atgactcagtctgagggtctgattgccctctccggagccagagaaggtgaaattggtcgg
gcattgttggctggcaagaagccgcttgccggtcagttactgcaggcgtggatggaggca
tttcctgatcgtttctatctggaacttcatcgtaccaaccgggcaggggatgaagagtgc
gttcatggttcagtggatctggcggcagagttcaactgtccggtggtggcgaccaatgat
gtaatgttcatgacccgggatgattttgaagcccatgaatccagggtgtgcatcggagaa
agcgtggttctggatgatccccgccgtgaacatcgctacagtgaggagcagtacctgaag
tccgagcaagaaatggttgagctctttgcggatatccccgaagcactggccaactccgtg
gcgattgcccagcgttgttctatcaatgtcaagctgggtgagtactttttgccggaatat
cccgtgccagaaggtaaaaccatggatcagtttttccgtgagttttcccataacggcctg
acggagcggctggcgtttctgtttgatacttcggcaccagactttccggaaaccgagaaa
ctctatcgcgaccgactggactttgagctgaataccattctgcaaatgggatttccgggt
tactttctgatcgtaatggactttatccagtggtctaaaaataatggtattcccgttggc
cccggtcgtggttccggtgccggttcactggtggcttatgcccagaaaatcaccgatctg
gacccgatcaaatacgacctgctgtttgagcgattcctgaacccggagcgggtgtcgatg
cccgattttgacgttgacttctgtatggaaggccgggaccgggtaattgattatgtggcc
cgaacctatgggcgaaatgcggtttcccagatcatcaccttcggtaccatggcggccaag
gcggtggtgcgggatgtggcccgggttcagggtaaatcctatggtctggcagatcgtctt
tccaaaatgattccttttgaaatcggcatgacgctcagtaaggccttcgaacaggaagaa
gccattcgggagtttctggagtccgatgaagaggcggccgaaatctgggagatggcgctg
aagctggaaggggtcacccgaaatgtcggtaagcacgccggtggtgtggtgattgccccc
accaggttgacggactttgcaccgctttactgtgatgagcacggtaaaggggtggtcacc
cagtatgacaagaatgatgtggaatacgcgggcctggttaagtttgacttccttggtctg
cgtacactgaccattattgactgggctctgaagttgattaacccccgccgggcgcagcgg
ggtgaagagcctctggccattgaagccatcgatcttgaagataaaagcgcctacgacatg
ctgaagcgggcggaaaccaccgccgtattccagctggaatcccgggggatgaaagatctg
atcaagcgtctgcagccagactgctttgaagatattatcgctttggtggctctgttccgt
cccggtccgttgcagtccgggatggtggacaactttattaaccgtaagcatggccgcgag
gaactctcgttcccggatgcccagtatcagcacgagtcgcttcagcctattttgcagccc
acttacggtattatcctgtatcaggagcaggttatgcagattgctcaggtgctggccggt
tacaccctgggcggtgcggatatgctgcgccgggccatgggtaagaaaaaaccggaagag
atggccaaacagcggacggtctttgaagagggtgcgatcagccagggggttgatggtgag
ctggccatgaagatctttgacctggtggagaagttcgctggttacggctttaacaaatcc
cactcggcagcctatgccctcgtttcgtatcagacgctgtggctgaaagcccactatcca
tcggagtttatggcggcggtcatgagctccgatatgcagaataccgataaggtggtgacc
tttatcgaagagtgtcgggatatggggcttaccgtgttgccgcccagcgtgaacagcggt
gaatatatgttcggtgttaatgatgatgggcatatcgtttatggtctgggtgcgatcaaa
ggggtgggtgaaggccctatagaagccattgtcagggcacgtaatgaaggtgggccattc
aaggatctgtttgatttctgtgagcgggtggatgccaaaagcatcaacaaacgagtgctg
gaggcattgatcaagtcgggagcactggatctgcttggtcctgctccggaaaagccaggg
caattgaattttaaccgtgccgtgcttgaatcgagccagcttgaggcaatcaaagcggcg
gatcaggcggcaaagagcctggattccggccatatggatatgtttggtgccctggtgcct
gccggggaagaagatgtctatgacacctacctgaaaaccagcgaatggacggataaggtt
cgcctgggtggagagaaggataccctggggctctatctgaccggtcaccctattgatgaa
tacgaaagtgaaatccgccactttatccgaaaccgtatcaaggatctgcagcctgcccgt
ggcgatagccagaatattgccgggctggtggtggatatgcgggtgatgaaaaacaagaaa
ggggacaaaatggcgtttgttaccctggatgatcgtactggaaggattgaggtgtcggtg
tttgccgatgtgtttgccgagtatcaacaccttctgcataaagacgcggtgctggtggtg
gaaggcgaagtcacgtttgatgattattccggtagtctgaaagtccgctcgaagcgagtg
atgaaagtggtggatgcccgcagccattacgcccgccgtctggttctagaggtttctcat
gagcagattgacggtcattttgggcgaaagctgtcgtcgatgctgggtgagcagccgggg
caacttccaatcaggattgattaccgccgggaagatgcctgtgccagtctgatgctgggt
gagcagtggctggtcagtcccagtgatgagctggtgctggaactcaggcagtggcttggt
aaaaatgctgcgaaagttgagtatgcttag
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