Endozoicomonas sp. SCSIO W0465: MJO57_19040
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Entry
MJO57_19040 CDS
T08210
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03420
Nucleotide excision repair
enw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJO57_19040
03430 Mismatch repair
MJO57_19040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_19040
Enzymes [BR:
enw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJO57_19040
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJO57_19040
MMR (mismatch excision repair)
Other MMR factors
MJO57_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
ResIII
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
USE34247
LinkDB
All DBs
Position
4230096..4232558
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AA seq
820 aa
AA seq
DB search
MKLTPHQQAVANHDKDHALCIAVAGSGKTSTLAQLVSNLLHKGANPRRLMVMMFNKAAQI
DFGKKLRTLASAQLAGFLENQRQLPEIRTYHATGLKLLRTLEGWQIRTPYNKQPLSEKVI
ELQVRALILKLAPETVKDRMRSDAPRLIEAAISFIESVKAHLTSPGQWFEQSGYTDDYRF
FIKLFDQFEQWRHQQRSITFTDMLYDPVTLIRAHPELVPKVADKMDIIIVDEYQDTSTLQ
HQFTRLIAGQRARMIAVGDPDQTIYEFAGANIDNILNHFQQDYGDTGDVKELTMPHTFRY
GHSIALAASHLISQNRSRKDVLCIAHPENAPSLIRLSQPGSDDSRFVVEALTEYLASGTP
PEDIAILVRVWAQAVPIELNLLEMGIPYRSDGPSLFQRPEIESLIDAMTLASGGFADLLP
EVRYHKLARLLTLPHIGLKQQPVDWLCQQLKDESHQLGKTLGKLAPKINDISDFQARKLT
QRAELFTWLEHSASKLKAHTLIAGYIQRSELYDSLRSMSLNEQRTDEQILAVKGFHRFLK
QLNEDTAHCCQHIAALIEKQKQQKNQRQRSGHGITLSSCHRAKGLEWPVVLLPGLTRQYW
PFLREDEIANLSAHKTSNAIESERRLLYVAMTRAKQQLHLFTAQGDLTGLPQKASRNQSW
SANRQPLTGSEHPDRISPFLLEMNLPHVLSLGNLLHDDADEDLAKAIDKTGLTPVSRRYV
CSARPALTERLKAIPDIETNRESTRAASNRDSTGASSPGDTPADGPWQLKAVINHAIFGR
GEVIEVNDRNFSIRFDSRQHGIKRFARIEEVRHLFSVLSV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacgccccatcaacaagccgttgccaaccatgataaagaccatgccctctgc
attgctgtggctggctcgggaaaaacctcaacgctggcacaattggtgagcaacctgttg
cacaaaggggctaatccccgtcgattgatggtgatgatgttcaataaagcggcccagatc
gattttggcaaaaagcttcgaaccctggccagtgctcagttggcaggctttctggaaaac
cagcggcagctccccgaaatcagaacctaccatgccacaggactgaaactgctcagaaca
ctggaaggctggcagatccgaaccccctacaacaaacaaccgttatcggagaaagtcatt
gagctacaggtaagggcactgattctgaaactggcaccggaaaccgttaaggaccgtatg
cgctcggatgccccccgcctgatcgaagcagccatcagctttattgaatcggtcaaagcc
catttaaccagtccagggcaatggtttgaacagtccggttataccgatgactatcgcttt
ttcatcaagctgtttgatcagtttgagcagtggcgccatcaacagcgatcgatcaccttc
accgacatgctgtacgatccggtgacactgatccgggcacacccggaactggtacccaaa
gtcgctgataagatggacattatcatcgtcgacgaataccaggatacgtccactctacag
caccagtttacccgtctgattgccggacagcgggccagaatgattgccgttggtgaccct
gaccagacgatctacgagttcgccggcgccaatatcgacaacattctgaaccattttcag
caggactacggcgataccggcgacgtcaaagaactcaccatgccccacaccttccgttat
ggtcacagcattgccctggcagccagccacttgatcagccagaaccggtcccgcaaagat
gtactctgtattgcccatccggaaaacgcgccatccctgattcgcctgagtcaacccggt
tcagacgacagccgttttgtggttgaggcgctcaccgagtacctggcatcaggaacacca
ccggaagatattgccattctggtgcgcgtctgggcgcaggctgtacccattgaactgaac
cttctggaaatgggcattccctaccgcagtgacggcccctccctgtttcaaaggccggaa
attgaatcattgatcgatgcaatgaccctggccagtggcggatttgccgacctgctgccc
gaggttcgttatcataagctggcaagactgctgacgctgccccatatcggcctgaagcaa
cagcctgttgactggctttgccagcagctgaaagacgaaagtcaccaactgggtaaaacc
ctgggcaagctggcccccaaaatcaacgacatcagtgactttcaggcgcgaaaactgaca
cagagagcagagcttttcacatggctggagcacagtgccagcaaactcaaggcccatacg
ctgatcgccgggtatattcaacggtcagaactatacgacagcctgagatccatgagcctt
aatgagcagagaacggatgaacagattctggcggtaaaaggctttcatcgcttcctcaaa
cagctgaacgaagacacggctcactgctgccagcatattgcggcattgattgagaagcag
aagcagcagaaaaaccagagacagcgatccggtcacggtattacgctcagctcctgccac
cgcgccaaggggttggaatggccggttgtgttactgccggggttaacccgccaatactgg
cctttcctcagggaagatgaaattgccaacctttctgcccacaagaccagtaatgccatt
gaatctgagcgtcgcctgctttatgtagcaatgacccgtgcaaaacaacaattacaccta
tttacagcgcagggcgacctcaccggtcttccccaaaaagcttccagaaatcagtcatgg
tcagctaaccgccaacccctcactggcagcgagcacccggaccgtatcagccccttttta
ctggaaatgaatctgcctcacgtcttatcactaggcaacctgctccatgacgatgcagat
gaagacctggccaaagccatcgataaaacaggccttacgccggtatcaagaagatacgtc
tgctcagcccgcccggcactgaccgaacgactgaaggctattcccgacattgagacaaac
cgcgaatcgacacgcgctgccagcaatagagacagcactggagccagcagtcccggggac
acacccgccgacggtccatggcagctcaaagcagtcattaatcatgccatctttggtcgt
ggagaagtgattgaggtgaatgaccgtaatttctcaatccgttttgacagtcgccaacac
ggcatcaaacgttttgccagaattgaagaggttcgccacctgttcagcgtcctctcagtc
tga
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