Endozoicomonas sp. SCSIO W0465: MJO57_19335
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Entry
MJO57_19335 CDS
T08210
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJO57_19335 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enw03019
]
MJO57_19335 (recQ)
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_19335 (recQ)
Enzymes [BR:
enw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJO57_19335 (recQ)
Messenger RNA biogenesis [BR:
enw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MJO57_19335 (recQ)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MJO57_19335 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
USE34301
LinkDB
All DBs
Position
4311955..4314141
Genome browser
AA seq
728 aa
AA seq
DB search
MSEQALQILKTVFGYDEFRSHQSAIIENILKRNDTLAIMPTGGGKSICYQIPALIFPGLT
LVISPLISLMEDQVNQLQALGIPAALLNSTLSSREYLETLGNVQKGTIKLLYMAPETLML
ERTRQLLDSIHLDCLTIDEAHCISEWGHDFRPEYRQLAGLRQQFPNAVCVALTATATPQV
QQDIKNSLQMADSNEFIASFNRTNLFLEVIEKQNPVVQTLRLIEKYPNQSGIIYCNSRRQ
VDELTAVLAGHNCSVAAYHAGLTNDERAANQSAFIRDDIQIIVATIAFGMGINKPNVRFV
LHFDMPRNIESYYQQIGRAGRDGLPAYCHFLFGYGDIQKVKFFINQKSESEQRIANLHLN
TLIAFAEAEECRRIPLLHYFGEHYTLENCQLCDNCLSEKQPLCNVTVPAQKFLSCIYRTG
QLFGAAYLIDVLRGSKAKKVLERQHDQLPTYGIGTELTKPQWQQLSRKLLQENLIIQDQE
FGSLKLTEAARTVLKGERQIEIRLTQRPEFTGKSKTAAEQQTQLDYNHTLFHTLRACRKV
LADQENVPPYIIFSDKSLMEMATWFPQSKESLLQINGVGQVKLDHYGDAFLDEITRFCSE
HQIAEIARPSRTVPLSSSVEKKVASGRHIEIGELFTRLGCLDQMQSDLNIKLSTTLSHLY
KYQSDVAQLPTTDAFICKSSLAPDQQDRVMAAMAIHGTERLRPVFEELRGEISYDELHLL
RLHYLTHR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagcattacagatactaaaaaccgtgtttggctacgatgagtttcgttcc
caccagagcgccatcatcgagaatatcctgaaacgcaacgacacgctggccatcatgccc
accggtggcggcaaatctatctgttatcagatcccggccctgatctttcccggcctgacc
ctggttatctcgcccctgatatccctgatggaagaccaggttaaccaactgcaggccctg
gggattcctgccgcactgctgaacagtacactctccagcagggaataccttgagaccctg
ggcaatgtgcagaaaggtaccatcaagctgctctatatggccccggaaaccctgatgctg
gagcgcacccgacagttgcttgacagtatccaccttgactgcctgaccattgatgaagcc
cactgcatttctgagtggggacacgatttccgcccggaataccgacagcttgccgggttg
cgccaacaattccccaacgccgtctgtgtggccctcacggccaccgccacgccacaggtg
cagcaggatattaaaaacagtctgcaaatggctgactccaatgagtttattgccagcttc
aaccggaccaacctgtttctggaagttatagagaaacagaacccggtggtgcagacactg
cgactgatcgaaaaatacccgaaccagtctggcatcatctattgcaactcacggcgccag
gtggatgaattgaccgccgtgctggctggccataactgctccgtggcggcctaccatgcc
gggcttaccaatgatgagagagctgccaatcagtccgcttttatccgcgatgatattcag
atcattgttgccaccatcgcctttggcatgggaatcaacaaacccaacgtacggtttgtc
ctgcactttgatatgccccggaatatcgaaagctactaccagcagattggccgtgccggg
cgggatggactgccagcctattgccacttcctgtttggctatggcgatatacagaaggtt
aagttttttattaaccagaagtctgaatctgaacagcgcattgccaacctgcacctgaac
accctgattgcctttgccgaggctgaagagtgccgccgcatacccctgctgcactatttt
ggcgagcactacaccctggaaaactgccagctgtgcgacaactgtctgtcagaaaagcag
ccgctctgcaatgttaccgtgcctgcccagaagtttctctcgtgcatctatcgcaccggc
cagctgtttggtgcagcctacctgatcgatgtgttgcggggctctaaagccaaaaaggta
cttgaacgccagcacgaccagctacccacctacggcatcggcaccgagctgaccaaaccc
cagtggcaacagctgtcccgcaagctcctgcaggaaaatctgattatccaggaccaggag
tttggcagcctgaaactgaccgaagctgcccggactgtgctcaagggtgagcgtcagata
gagatcaggctgacccagcggcctgagtttaccggtaaaagtaaaacagcagcagaacaa
cagacccaacttgactataaccatacgttattccatacactgcgagcctgtcgaaaggtg
ctggcagaccaggaaaacgtgccaccctatattattttttctgataaatccctgatggaa
atggccacctggtttccccagtcaaaagaaagcctgttgcaaatcaacggggttggccag
gtgaaactggatcactatggggatgcctttcttgatgaaatcaccagattctgcagcgaa
caccagattgccgaaattgccaggccttcacgcacagtccccttgagtagctcagtggag
aagaaggttgcatcaggccgccatatcgaaattggcgaattatttacccgacttggctgt
cttgaccaaatgcagagcgacctcaacataaagctgtccaccaccctcagccatctctac
aaataccagagcgacgttgcccaactgccgacaaccgacgcctttatctgcaagtcaagc
ctggctccggaccagcaagaccgggtgatggcggcgatggctatccatggtacagagcgc
ttacgaccggtatttgaagagctgcggggagagatcagttatgatgagctgcacttatta
aggctgcattatctgacccacagataa
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