Endozoicomonas sp. SCSIO W0465: MJO57_29380
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Entry
MJO57_29380 CDS
T08210
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
enw
Endozoicomonas sp. SCSIO W0465
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_29380 (sbcD)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJO57_29380 (sbcD)
Archaeal homologous recombinant proteins
MJO57_29380 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
USE36110
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Position
6547047..6548360
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AA seq
437 aa
AA seq
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MRILHTSDWHLGQHFMGKSREAEHQAFLDWLIELVQEQRIDALIIAGDIFDTGTPPSYAR
GLYSRFIVSLRNTHCQQLIVIGGNHDSVATLNESKELLACLNTFVVGGVSKDAREQVLVL
NNGQGDPGAVICAIPFVRPRDVLESQAGETGEGKQQALQQAIAAHYQTIYTEAEKLAGER
LPIIATGHLTTVGGQLSESVREIYIGTLSAFPVAAFPEAHYIALGHLHRPQVVAKQEHIR
YSGSPIPLSFDEAGSDKQVIIVDFKGNDLNKIESVMVPVFRPLISLRGSLDSIDQQLAAL
ASERAIEPADEPANENDQQQATLNPWLEIEITTDAYLHDLQSRVEQLVLAREELSSFELL
RVRRKREKAAASLTVADQESLAELNVEDVFQQRLQQEELTDEQLQQLTGAFQEILEDVFA
ADKEHPMLAHHGQKDNA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttcacacatctgactggcaccttggccagcactttatgggcaaaagccgg
gaagcagaacaccaggcctttctggactggctgatcgagctggtgcaagagcagcgcatt
gatgccctgattattgccggtgatatctttgataccggcacaccaccgagctatgccagg
ggactgtacagccgttttattgtcagcctgcgcaatacccactgccaacagcttatcgtg
attggtggcaaccacgactcagtagcgacactgaatgagtcgaaagagctgctggcctgc
ctgaatacctttgtggtgggtggcgtcagtaaagacgcccgggaacaggttctggtgttg
aacaatggtcagggtgatcccggtgcagtcatctgcgccattccttttgtccgtccaagg
gatgttctggaaagtcaggcgggagagaccggtgagggtaaacaacaggcattgcaacag
gcgattgctgcccactatcagaccatttacacagaagctgaaaagctggcaggggaacgt
ctgcccattattgccaccggtcatttaacgacagttggcggacaactgagcgaatccgtg
cgtgagatttatatcgggactctgtcagcattcccggtagccgcattccctgaagcccac
tacattgccctcggccacctgcaccggccacaggtggtggcgaagcaggaacatatccgc
tactcaggttcaccaatccccctgagttttgatgaagccgggtccgataagcaagtcatt
attgtggacttcaagggaaatgatctgaataaaattgagtccgttatggttcctgtgttc
aggcctctgatcagcctcaggggctccctggacagcattgaccagcagctggccgctctt
gccagtgaacgggccattgagccagccgatgagccagccaatgagaatgatcagcagcag
gcgacgctcaacccatggctggagattgaaatcaccacggatgcttacctccatgacctg
caaagccgggtcgagcagctggtgcttgccagggaggagctgtcctcatttgagctgctg
agggtcagaagaaagcgggaaaaggcagcggcatccttaaccgttgccgaccaggagagt
ctggccgagttgaatgttgaagatgtttttcagcaacggcttcagcaggaagagcttacc
gatgaacaattacagcagctgaccggtgcgtttcaggaaatactcgaagacgtgtttgca
gccgataaagagcatcccatgctggcgcaccatggccagaaggacaacgcctga
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