Endozoicomonas sp. SCSIO W0465: MJO57_32110
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Entry
MJO57_32110 CDS
T08210
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03420
Nucleotide excision repair
enw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJO57_32110 (uvrD)
03430 Mismatch repair
MJO57_32110 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_32110 (uvrD)
Enzymes [BR:
enw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJO57_32110 (uvrD)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJO57_32110 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MJO57_32110 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
USE36602
LinkDB
All DBs
Position
7131975..7134164
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AA seq
729 aa
AA seq
DB search
MDVTSILDSLNDAQRSAVAAPVSSMLVLAGAGSGKTRVLVHRIAWLVQAEAMSAYSVMAV
TFTNKAAAEMRSRIEELLGIAPRGMWVGTFHGLSHRLLRAHWKETGLPENFQILDSDDQL
RVLKRIMKAMQLDEQKWPPRQAQWFINSKKDEGLRPDYIDPGYDPFERTMVDVYRRYHDY
CEQAGVVDFGELLLRAHELLLKRADILQHYRERFRYILVDEFQDTNAVQYAWLRLLAGDQ
DKLMVVGDDDQSIYGWRGARIENIRQFTHDFPNAQTIKLEQNYRSTGNILQAANAVIANN
PDRLGKELRTDGDKGEPVHLYAGFNEMDEARFITDRIKDAISNGMARSDIAILYRSNAQS
RILEEAMLRAAIPYRIYGGQRFFERAEIKNALAYLRLVSSPNDDTSVERVINIPTRGIGE
KTVEKLREAARSQGISLWQALKNLVASSAVGGKAGKSMAAFVELIESMNRAGETLDLGEL
SDHVVTMSGLIDHHSKEKGEKGQARVENLEELVNACRQFDMDELFLDGDPNADQAEKTEA
ITPLDAFLAHAALESGTNQADQFQDSVQMMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLD
EGNLEEERRLCYVGITRAMETLYLTYAESRRLYGSETMNRPSRFIREIPGELLQEVRLGG
TITRPVVTRMAPASPDHGLSLGQRVHHNVFGEGVVINYEGDGNQARVQVNFDSEGAKWLM
MAYANLSPI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaacctcaatacttgactcactgaatgatgcgcagcgcagtgctgttgcagct
cccgtcagctctatgctggtactggcaggtgccggtagtggtaaaacccgcgttttggtt
catcggatcgcctggctggttcaggctgaagccatgtcagcctattcagtgatggccgtc
accttcaccaacaaggcggcagctgagatgcgttctcgtattgaggaactgctgggcatc
gccccaaggggaatgtgggtcggcacttttcacggcctttcccatcgccttctccgggca
cactggaaggaaacagggctaccggaaaactttcagattctggacagtgatgatcagctg
cgcgtactcaaacggatcatgaaagccatgcagctggatgaacaaaaatggcctccacga
caggcccaatggtttattaacagcaagaaagatgaagggctccgtcctgattacattgat
cctggctatgacccatttgaacgaaccatggtggatgtttatcgccgctaccatgactac
tgcgagcaagccggagtggtcgacttcggagaactgctgctgcgcgcgcatgagctatta
ctgaagcgagcagatattctccagcattaccgtgagcgttttcgctatattctggtggat
gagtttcaggataccaacgccgtgcagtacgcctggctacgacttctggccggagaccag
gataaactgatggtggttggcgatgatgaccaatcgatttacggctggcgcggggccaga
attgagaatatacgtcagtttacacatgacttccccaatgcccagaccatcaaactggaa
cagaattaccgctctaccggcaatatcctccaggcagccaatgccgttattgccaacaac
ccggatcgtttaggaaaagagctgcgcaccgacggcgataaaggtgagccagtgcacctg
tacgctggttttaacgaaatggacgaagcccgatttatcacagaccggattaaagatgcc
atttccaacggcatggcccgcagtgatatcgccatcctttatcgatccaacgctcaatcc
cgtattcttgaagaagcgatgctcagggctgcgatcccctatcgaatctacggtggacag
cgtttctttgagcgagcagaaatcaaaaatgccctggcctatctccgtctggtcagttct
cccaatgacgacacctctgtggagcgggttatcaatattccgacccggggcattggggaa
aaaacggtagaaaagctcagagaggctgctcgaagccaggggatttcactctggcaggcc
ctgaaaaacctcgtggcatcgtctgcagttggtggcaaggcgggtaaatccatggcggcc
tttgtcgagctgatcgagtcaatgaaccgtgccggtgaaacactggatcttggcgaactt
tctgatcacgttgtcaccatgagtgggctgattgaccaccacagtaaagagaagggggag
aaaggtcaggctcgggtagaaaacctcgaggaactggttaacgcctgtcgtcagtttgat
atggatgagctatttcttgatggagatccgaatgcagatcaggctgaaaaaaccgaagcc
ataacccctctggatgcgttcctggcccatgcggcgctggaatcgggcaccaatcaggca
gatcaattccaggacagcgtgcaaatgatgacactgcactcggcaaaaggtcttgagttt
cccctggtctttctggccggtatggaagaggggttattcccccacaaaatgtcactggat
gaaggcaacctggaggaagagcgtcggctttgttatgtgggcataacccgtgccatggaa
accctgtatctgacgtatgcggaaagccgacgcctgtatggcagtgaaaccatgaaccgt
ccttcccgatttattcgggagatccccggtgagttgcttcaggaggttcgccttgggggc
accattacccgaccggtcgtaacccgcatggcacccgcatcgcctgatcatggactgtca
ctcggccagcgcgtccatcacaacgtatttggcgaaggtgttgttattaattatgaaggt
gatggcaatcaggcccgggttcaggtcaattttgactctgaaggcgctaaatggctgatg
atggcctatgccaatctttctccgatttag
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