Enterobacter sp. E20: NI40_000975
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Entry
NI40_000975 CDS
T04118
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
enx
Enterobacter sp. E20
Pathway
enx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NI40_000975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enx03021
]
NI40_000975
03400 DNA repair and recombination proteins [BR:
enx03400
]
NI40_000975
Enzymes [BR:
enx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NI40_000975
Transcription machinery [BR:
enx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NI40_000975
DNA repair and recombination proteins [BR:
enx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NI40_000975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALL15783
LinkDB
All DBs
Position
216227..220450
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERHQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGIQIGAGDALARIPQESSGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSEFLEGEQVEYSRVKIANRELEANGKIGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttattaaagtttctgaaagcgcagactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgttgaagtgacccagaccaaagtgcgtcgtgag
cgcatgggccacatcgagctggcgtctccgaccgctcacatctggttcctgaaatctctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgcgatatcgaacgcgttctgtac
ttcgaatcttatgtggttatcgaaggcgggatgacgaacctggaacgtcatcagatcctg
actgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctattcaggccctgctgaagagcatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaaacgtaaaaagctgaccaagcgt
atcaaactgctggaagcgttcgttcagtctggtaacaaaccagagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccactggttccgctggatggtggtcgtttc
gcaacgtccgatctgaacgatctgtatcgtcgcgttatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggccgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaaaatg
gttgagcgtgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaactctgcaccgtttgggtatccaggcatttgagccagtc
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctcgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccagcgaacggtgaacctatcatc
gttccttctcaggacgttgtattgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgaatatgaaaaagatgaaaac
ggcgaattcgttgcgaaaaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagcg
atctccaaaatgctgaacacctgttaccgcattctgggtctgaagccgaccgttatcttc
gctgaccagacaatgtataccggctttgcttatgcagcgcgttcaggtgcatctgttggt
atcgatgacatggtcatcccagagaagaaacacgagatcatctctgaagcggaagccgaa
gttgctgagatccaggagcagttccagtctggtctggtaaccgcgggcgaacgctataac
aaagttatcgatatctgggcagcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcagaccgaaaccgtgattaaccgtgacggcgtagaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttccgcagcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacccacggtgctcgt
aagggtctggcggataccgcactgaaaactgcgaactccggttatctgacgcgtcgtctg
gttgacgttgcgcaggatctggttgtgaccgaagacgattgtggcaccctcgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccactgcgcgatcgcgttctg
ggtcgtgtaaccgcggaagacattctgaagccgggtactgcagacattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtacgttccgttgtatcctgtgacaccgactttggtgtatgtgcgcactgctacggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagcaatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatcacgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtctgttgttaactccgctggcaagctggttgtgacctctcgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gcggttatggcgaaaggtgatggcgagcaggttgctggcggtgaaaccgttgcaaactgg
gatccacacaccatgccggttatcaccgaagtaagtggtttcatccgcttcactgacatg
atcgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggtggtaaagatctgcgtcctgcactgaaaatc
gttgatgctcagggtaacgacgttctgatccctggtaccgacatgcctgcgcagtacttc
ctgccgggtaaagcgatcgttcagctggaagatggcattcagatcggtgcgggtgatgct
ctggcacgtattccacaggaatccagcggtaccaaggatatcaccggtggtctgccacgc
gttgcggacctgttcgaagcacgtcgtccgaaagagcctgcaatcctggctgaaatcagc
ggtatcatctccttcggtaaagagaccaaagggaaacgccgtctggttatcactccagta
gatggcagcgaaccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgatggtccagaagctccgcacgacatt
ctgcgtcttcgtggcgtccacgcggtaacgcgttacatcaccaacgaagtacaggacgtt
taccgtctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcaaccatcgaaaacgcaggcagctccgagttcctggaaggcgagcaggtt
gaatactcacgcgtcaagatcgctaaccgcgaactggaagcgaacggcaaaatcggtgcg
accttctcgcgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tctgcagcatcgttccaggaaacgactcgtgtcctgaccgaagccgctgttgcaggtaaa
cgtgatgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggcgggt
accggttatgcgtaccaccaggatcgtatgcgtcgtcgtgctgcgggcgaactgccagct
gcaccgcaggtaactgctgaagatgcatccgcgagcctggcagaactgctgaacgcaggt
ctgggcggttccgacaacgagtaa
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