Enterobacter sp. E20: NI40_003940
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Entry
NI40_003940 CDS
T04118
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
enx
Enterobacter sp. E20
Pathway
enx03030
DNA replication
enx03430
Mismatch repair
enx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI40_003940 (dnaE)
03430 Mismatch repair
NI40_003940 (dnaE)
03440 Homologous recombination
NI40_003940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enx03032
]
NI40_003940 (dnaE)
03400 DNA repair and recombination proteins [BR:
enx03400
]
NI40_003940 (dnaE)
Enzymes [BR:
enx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI40_003940 (dnaE)
DNA replication proteins [BR:
enx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI40_003940 (dnaE)
DNA repair and recombination proteins [BR:
enx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI40_003940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALL16335
LinkDB
All DBs
Position
850861..854343
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLVGDEMTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNSALVDQCVSFYEEYFPDRYYLELIRTGRQDEES
YLHAAVALAEERGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIARRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EERLEFLFPDEAVRKEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGEHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcgaagaccgggccgctggtaaaaaaggcggcctcccttggcatgcccgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcacggtgcg
ggaatgaagcctatcgtcggcgcagattttcatgtccagagcgatctcgtcggcgatgaa
atgacgcaaatctccgtgctggcgatgaacaacacgggctatcaaaacctcactctgctt
atctcaaaagcctatcagcgcggatatggtgcgctgggcccgtggatcgacagggactgg
ctggctgagctgaacgaagggctgctgctgatctctggcggccgtatgggcgatgtcggt
aaatgtctgctgcgcggcaatagcgcgctggtggatcagtgcgtctcgttctatgaggag
tatttcccggatcgttattatctggagttgatccgcaccggtcgccaggacgaagagagc
tatctccatgcggcggtcgcacttgcggaagaacgcgggctgcccgtcgtcgcgacaaac
gatgtacgcttcctcgagccgggagattttgacgctcacgaaattcgcgtggcgatccac
gatggcttcacgctcgacgatccgaaacggccgcgtaattactccgctcaacagtacatg
cgcagcgaggaggagatgtgtgaactcttctccgatatccccgaagcgctggaaaacagc
gtagagatcgccaggcgctgtaacgttaccgtccgcctcggcgaatacttcctgccgcag
ttcccgacgggtgacatgaccacggaagatttcctggtcgtgaaatcaaaggaaggtctg
gaagagcgtctggaattcctgttcccggatgaggccgttcgcaaagagaagcggccgccg
tacgatgagcgcctggatattgaactccaggtcatcaaccagatgggcttcccgggctac
ttcctgatcgtaatggagtttatccagtggtcaaaggataacggcgtaccggtcggaccg
gggcgtggctccggtgcgggatcgcttgtggcctatgcgcttaaaattaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtttccatgccc
gactttgacgtcgacttctgcatggagaaacgcgaccaggtgatcgagcacgttgccgat
atgtacggccgtgatgcggtatcgcagattattacgttcggtacgatggcggcgaaagcg
gttatccgcgacgtcggccgcgtgctgggccacccgtacgggtttgtcgatcgtatttcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcgtttgaagccgaacctcag
ctgccggaaatctacgaagctgacgaagaagtgaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggcaagcatgcggggggcgtggttatcgccccgacc
aaaattaccgacttcgcgccgctctactgcgatgaagcgggtgagcacccggttactcag
tttgataagaacgacgtagaatacgccgggctggtgaagtttgacttcctcggcctgcgt
acgctgacgatcatcgactgggcgctgaagatgatcaacccgcgccgggaaaagcagggc
cttgagccgatagacattgccgccatcccgctcgatgacaagaaaagtttcgacatgctg
cagcgctcggagacgacagccgtcttccagcttgaatcccgcggcatgaaagatctgatt
aaacgcctgcagcccgactgcttcgaagatatgatcgcactggtcgccctgttccgtccg
ggcccactgcagtcagggatggtagataactttatcgaccgtaagcacggtcgcgaagag
atttcttacccggacgttcagtggcagcatgaaagcctgaagccggtgctggagccaacc
tacggcattatcctgtatcaggaacaggtcatgcagattgctcaggtgctttccggctat
acgctcggcggcgcggacatgctgcgtcgcgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttccatctttgaagacggggcgaagaaaaacggcgttgacggcgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatcccac
tccgccgcctatgctttggtgtcgtatcaaacgctgtggctaaaagcgcactatcctgct
gaatttatggcggcggtaatgacggccgatatggacaacaccgagaaggtggttggcctg
gtggacgagtgctggcgcatgggccttaagatcctgccgccggatattaactcagggctc
taccacttccacgtcaacgacgacggagagatcgtttacgggatcggcgcgatcaaaggc
gtgggcgaaggtccgatcgaggcgatcatcgaagcgcgtaacaacggcgggtatttccgc
gagctgttcgatctttgcgcccgtaccgacaccaaaaaactgaaccgtcgcgtgctggaa
aaactgatcatgtcaggcgcgtttgacaggctggggccgcaccgcgccgcgctgatgaat
tccctcggcgacgcgctgaaagcggcggatcagcatgcaaaagcggaagccattggtcag
gcggatatgttcggggtgctggcggaagagccagagcagatcgagcaatcttattccaac
tgccagccgtggccagaacaggtggtactggatggggagcgtgagacgttaggcttgtac
ctgacggggcacccgatcaaccagtacatcaaagaaattgagcgctatgtcggtggccac
aggcttaaagatatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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